| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1434 |
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| Symbol | |
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| ID | 6115674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1812995 |
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| End bp | 1815256 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632922 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001759821 |
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| Protein GI | 170725795 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000294975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCC AACTTAAGCT AACTTACCTT GCCATATTAG CTAGCCTTAG TAGCTATGCT
CACACCAGTG TTGCTGCCGA TAACAGCGAA ACTGAGGCTC AGGGGAACAT AGAACAAATT
GTTGTAACTG GGTCATTCAG TGGTAAAGCC ATTAGAAAAG ATGAAGCCAG TTTTGCTATC
AGCTCTTTCA CCGATGAAGA TATTCAAAAG ATGTCCCCAA AAAGCACCGC TGACCTTTTT
AAAGCGGTAC CAGGTGTATG GGCAGAAAGC TCAGGTGGAG TATCTGGGGC TAATGTTTTT
GTCCGAGGTT TCCCTGGTGG CGGTGATGCT CCTTTTCTTA CGGTCCAACT CCAAGGTGCA
CCTATTTTTC CCCCTTCAAC ACTCTCGTTT CTTGAAAACT CAACCCTATT TCGCCTCGAT
GAAACCGTGG AGTTTATGGA AGCCCTTAGA GGGGGGCCTA ACCCCGTTAT CTCCAATGGC
CAGCCCGGTC TCACCACTAA CTTTCTGCTA AAGGAGGGAA GTGATGATAC CGAAGGCTTA
ATCAAATACT CCACTTCAGA CTACGGACTG CAGCGGATCG ACGGTGTGTT AAGTGGAAGT
CTTGCTGAAG ATCTTTACTT CATGGTAGGC GGATATTTTA AAAGCTCACC AGGTGTTCGG
GATGCTGGTT TCGATGCTGA AGAGGGTCAG CAATTTACTA TCAATCTAAC CAAAGAACTC
GATAACGGTA AGATAAACCT CTATACCCGA ATCACAGATG ATCATGGTGT CTGGTACCTA
CCTGCACCGC TGAATGTCGA CACTGTTGAT AATGAATATG TTCAGATAGG AACCAATAAC
CGCCAAGCCA CTGTTCAATA CGGACCTAAC AGTACAAGTG AAGCCTTTGA CTTTGGCGAT
GGTAGAGGCT GGAACGGATC TGTCACAGGC GGAAGCATAG ATCTAAGTTT TGATAACGGC
TGGGATCTCG TCGACCGATT TATCTATACC AAAGGGGATG CCGATACCTA TGGTTTAGTT
CCTAATGGAG ACCCAACACA ACTATCTAAC GTCGCTGACA GCGGCAGTAC TGCGACTGGT
GCAGTCACAG GCACGGAATA TGCGGGCTCC ACTATGGTGC AACAGATTGG CCGCTGGGTT
GTTAAGAAGC AGATTGAGTC CTTTACCAAT GACTTTATCT TAACCAAAAC CTTTGAAGAT
GTTTCAGTCA CAGCAGGCTA TTACAACTCA ACCTTCAAGG CGAAGGACTG GTGGGCACTG
GGTAATCAAG CTTACCACGT GGTTGAATCT GGCGGTGAGA TGCTAACAGG TATCGACTGT
AATGATAATC AGGACAGTTG CGGCTGGAAC TATGATATCA ACAGCATAGG TGAAGGTACC
ACCCAAGCGC TTTATACCGC TATCTCCTAC GAAATCTCTG ACGATTTAAC CATAGATGCA
GGCCTTAGAG GGGAGAATCA TCAGATAGAG TACACAGTTG ATGAAGGCTT AGATGGTAAA
ATCACTAAAG CCGTCTCCTA TGATGAATCC AGCACAGCTT GGACCGTGGG AGCAAACTGG
ATGTTTGCCG ATCAGATGGG CGTATTTGCT CGCATCAACG ATGGTAGTAA GATGCCCTAT
TTTGACGACT TCAGAGATAA TTTTGGCGCT TATGAAAGTG GTGAAGATCT GATCAAAGAG
GTCAGCCAAT ATGAGCTAGG TTATAAATTA GTAGATGACG ACTTCGAGCT CTTCGCCACC
CTATTTATGA ATGAAGTGAA AGGCGATACC TTTGTTCGCC AACCCGGCGC CCCGGGTGAG
ATTCTCACCA ATGAAGCCTA CGGCATAGAG ATCGACTTTA ACTACTTCAA TGATAACAGT
TTCTCAGTCA ATTTGAACTC GACCATTCAG GAAACTGAAA TCACAGAAAG CCCGACCAAC
GAAGGTAACG AAGCCCAGAG ACAACCAGGT TGGCAGGTTC GCGTCACTCC AAGTTATGAC
ATAGAGTTAG ACAACGGGAT GTACGCAACC CTATACGGCA CGATATCTGC CGTTGGTGAA
CGTTATGCAA ACAATGAAAA CACAGTAACT TTGGATGGTT ATGAAAAAGT TGACCTAGGA
GTACTTTTTA ACTTCACTGA CGAAGTTCAA GTGCAGTTAG CCGTTAGCAA CTTAACCGAT
GAAGAGGGGT TAACAGAGGG TGATCCTAGA AGCTCTATCT CGTCAAACGG ACGCTACATC
CTGCCTAGAT CCATTGATTT AAGTCTGAGT TATGCATTCT AA
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| Protein sequence | MKFQLKLTYL AILASLSSYA HTSVAADNSE TEAQGNIEQI VVTGSFSGKA IRKDEASFAI
SSFTDEDIQK MSPKSTADLF KAVPGVWAES SGGVSGANVF VRGFPGGGDA PFLTVQLQGA
PIFPPSTLSF LENSTLFRLD ETVEFMEALR GGPNPVISNG QPGLTTNFLL KEGSDDTEGL
IKYSTSDYGL QRIDGVLSGS LAEDLYFMVG GYFKSSPGVR DAGFDAEEGQ QFTINLTKEL
DNGKINLYTR ITDDHGVWYL PAPLNVDTVD NEYVQIGTNN RQATVQYGPN STSEAFDFGD
GRGWNGSVTG GSIDLSFDNG WDLVDRFIYT KGDADTYGLV PNGDPTQLSN VADSGSTATG
AVTGTEYAGS TMVQQIGRWV VKKQIESFTN DFILTKTFED VSVTAGYYNS TFKAKDWWAL
GNQAYHVVES GGEMLTGIDC NDNQDSCGWN YDINSIGEGT TQALYTAISY EISDDLTIDA
GLRGENHQIE YTVDEGLDGK ITKAVSYDES STAWTVGANW MFADQMGVFA RINDGSKMPY
FDDFRDNFGA YESGEDLIKE VSQYELGYKL VDDDFELFAT LFMNEVKGDT FVRQPGAPGE
ILTNEAYGIE IDFNYFNDNS FSVNLNSTIQ ETEITESPTN EGNEAQRQPG WQVRVTPSYD
IELDNGMYAT LYGTISAVGE RYANNENTVT LDGYEKVDLG VLFNFTDEVQ VQLAVSNLTD
EEGLTEGDPR SSISSNGRYI LPRSIDLSLS YAF
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