| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1411 |
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| Symbol | |
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| ID | 6115651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1771533 |
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| End bp | 1772882 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641632899 |
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| Product | sodium:neurotransmitter symporter |
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| Protein accession | YP_001759798 |
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| Protein GI | 170725772 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTAC GTGGACAGTT TTCATCTAAG CTTGGTTTTG TACTCGCGGC GGCAGGGTCT
GCTGTGGGAC TGGGGAACAT TTGGGGTTTC CCTACTCAGG TTGCTAGTAA TGGTGGTGCC
GCTTTTGTTC TAGTCTATTT GATATTAACG TTTTTATTAG CCTACCCCAT CTTAATGGCT
GAGTTAGTAA TAGGGCGTTA TTCTCAGTCG AACATGGTTA ATGCGCTTCA GGGAATATCT
CAAGGTCCTG TGAGTAAATT AAGTGGAAAA CTATCTGGTT ACTGGGCACT AACAGTTGTT
TGTTTAATTT TAAGTTTTTA CTCCATCGTT GCGGGGTGGA TGTTGGCTTA TGCACTAGCG
TCTATCACTG ACCTATTAGG CTTAGAACAA ACATCGCTTT GGCTTACGGC ATTTTCAACA
CCGAGAAACT TAATATTTTG CTTTATCTTC TCTTTATTAA CAGTAGGGAT TGTTCATAAA
GGAGTGAGCG ATGGAATAGA GAAGTGGTCG GCTAGATTGA TGCCTTTGCT ATTAATTTTA
CTTATTTCTT TGATTATTTT TGTGGCGACT CTTGATGGCG CTGCTTTGGG TTGGGAAGTT
TATGTTATTC CTGACTTTGC TAAAATATTG CATTCAGATC TATTAATTAG TGCTCTAGGG
CAGGCTTTCT TCTCACTCTC TTTGGGGGTT GGAACCATGC TTATTTATGG ATCATATGTC
AGTAAAAAAG AGAATATAGT GACCTTAGGG GCTCAAGTCA CCTTAGTGGA TATTGGCATC
GCAATATTAG CTGGCATGTT AATTATTCCT GCCATGTATG TGGCACAACA TAATGGCGTG
ACTATTTTTA CTGAAGCTGG TGAATTAATT AATGGTGATA GATTGATATT TACAGTGATC
CCAGAGCTAT TTACAGCGAT GGGAGATCTT GGCAATGTTA TCTCTTTTGT TTTTTTCTCA
TTGATGGCGA TTGCAGCCGT CACCTCATCC ATCTCTATGC TTGAAGTGCC TGTTGCTTAC
ACGGTTGAGA ACAGCTCACA ACCCAGAAGT CGGGTCACTT GGCTGATTGG TGCCATCATT
GTGTTAATAA GCACTAGTAT TGTATTTAAT TTTGAGTTGC TGTTTGGAGC GGTTATTTCA
TTTACCACTC AATATAGCCA ACCTCTACTT GGGTTAGTTT TATCTCTATT TGCAGGCTGG
GTGTGGCGAC GAGACTCGAT ATTAAGTGAG TTGAAGCTGG GTTGTCCTGA GATTGAGCAT
TCATTGTTTT GGAAAATATG GCCAAGTTAT GTCCGTTTTG TTTGTCCTGT GATTATTTTG
GTGATGTTTT ACCATTCAGT GTTTAATTAG
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| Protein sequence | MSVRGQFSSK LGFVLAAAGS AVGLGNIWGF PTQVASNGGA AFVLVYLILT FLLAYPILMA
ELVIGRYSQS NMVNALQGIS QGPVSKLSGK LSGYWALTVV CLILSFYSIV AGWMLAYALA
SITDLLGLEQ TSLWLTAFST PRNLIFCFIF SLLTVGIVHK GVSDGIEKWS ARLMPLLLIL
LISLIIFVAT LDGAALGWEV YVIPDFAKIL HSDLLISALG QAFFSLSLGV GTMLIYGSYV
SKKENIVTLG AQVTLVDIGI AILAGMLIIP AMYVAQHNGV TIFTEAGELI NGDRLIFTVI
PELFTAMGDL GNVISFVFFS LMAIAAVTSS ISMLEVPVAY TVENSSQPRS RVTWLIGAII
VLISTSIVFN FELLFGAVIS FTTQYSQPLL GLVLSLFAGW VWRRDSILSE LKLGCPEIEH
SLFWKIWPSY VRFVCPVIIL VMFYHSVFN
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