Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1387 |
Symbol | |
ID | 6115627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1742228 |
End bp | 1743187 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641632875 |
Product | thiamine-monophosphate kinase |
Protein accession | YP_001759774 |
Protein GI | 170725748 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0611] Thiamine monophosphate kinase |
TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0324994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000216996 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | GTGAAAGAAT TTCAATTAAT CGAACACTTT TTTGCCAAGC AAGCTCAGTC ACGCCGTGAC GTTGAGCTAG GTATTGGTGA CGACTGTGCT TTAGTGACAC CCGCACTCAA TAAATCCATC GCAATCTCCT GTGACACCTT AGTCGAGAAT GTTCACTTCT ATCCCGATAT TCCTCCAAAA GCCTTAGGTT ATAAATCACT GGCGGTTAAT CTGTCTGATC TTGCTTCTAT GGGCGCAGAG CCTGCTTGGA TGACGTTAGC GCTGACATTG CCAGAAGTGG ATGAGCAGTG GTTAACCAGT TACAGTGCTG GTCTATTTGA AGCTGCTGAG TATTACAATA TTGCCCTTGT TGGCGGTGAC ACAACTCTTG GGCCGCGCTC CATCACAATT ACAGTTAATG GGCAGGTACA AGCGGGCACA GGTTTAACAC GAAGTGGTGC CAGAATTGGT GATTGGATCT ACGTCACTGG CACGCTAGGC GATTCGGCTT TGGGGCTAGA TCTTATTCGT GGTAACAGGG CGTCGAGTCC TGAAGATGCA GATTTTTTGA TTAATCGTCA CTACTACCCA ACGCCACGAG TACTTGCAGG TCAAGCCCTT CGTACGCTGG CTTCAAGTGC TATCGATCTT TCCGATGGGT TACTGAGCGA TATTCAGCAT CTACTAAAAC AGTCTGGTAT TGGAGCCACT ATCGATGTGG ATCTCTTGCC ACTGTCTGCT TCTCTTAAAA ACTCTGTAAC AGAGGAGGAA GCACTGAGTT ATGCATTAAC GGGGGGGGAA GATTATGAGC TGCTCTTTAG TGTTCCAGAA GCACAAAAAG GGGCACTTGA AATAGCTCTC GCAAATACCG GTGTTTCATT TGCTCAGATA GGCCAGATAA GCACAGGTGA TAAGTTGAAA CTACTTCGTG ATGGTCAGCC TTACACCCCT ATTAATATTG GATTTGAACA TTTTTCCTGA
|
Protein sequence | MKEFQLIEHF FAKQAQSRRD VELGIGDDCA LVTPALNKSI AISCDTLVEN VHFYPDIPPK ALGYKSLAVN LSDLASMGAE PAWMTLALTL PEVDEQWLTS YSAGLFEAAE YYNIALVGGD TTLGPRSITI TVNGQVQAGT GLTRSGARIG DWIYVTGTLG DSALGLDLIR GNRASSPEDA DFLINRHYYP TPRVLAGQAL RTLASSAIDL SDGLLSDIQH LLKQSGIGAT IDVDLLPLSA SLKNSVTEEE ALSYALTGGE DYELLFSVPE AQKGALEIAL ANTGVSFAQI GQISTGDKLK LLRDGQPYTP INIGFEHFS
|
| |