Gene Swoo_1386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1386 
SymbolnusB 
ID6115626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1741690 
End bp1742094 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content44% 
IMG OID641632874 
Producttranscription antitermination protein NusB 
Protein accessionYP_001759773 
Protein GI170725747 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.24744e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.73343e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAGCCTT CTGAGCGCCG CAAGGCCCGC CGTTTAGCCG TTCAAGCCAT TTACTCTTGG 
CAGTTAAGTG GAAATAACAT TGCTGATGTT GAGCATGAGT TTCTAACTGA GCAGAAGATT
GATGGTATCG ATGTAACTTA CTTCCGTGAG CTACTATCGG GAACAGCGAC AAAACAGGCT
CAAATAGACG AGTTGATCAC ACCTCATATT GAGCGTCCTT ATGATGAGGT CTCTCCTATA
GAGAAAGCTG TGTTAAGACT GGCAACTTAT GAGCTTACAT TCCGTAAGGA TGTACCTTAT
AAAGTGGCAA TTAATGAGGC TATCGAACTA GCGAAAGCGT TCGGTGCCGA AGATGGCCAT
AAGTTCGTAA ATGGTATTCT CGACAAGATT GTAGGTCGTA AGTAA
 
Protein sequence
MKPSERRKAR RLAVQAIYSW QLSGNNIADV EHEFLTEQKI DGIDVTYFRE LLSGTATKQA 
QIDELITPHI ERPYDEVSPI EKAVLRLATY ELTFRKDVPY KVAINEAIEL AKAFGAEDGH
KFVNGILDKI VGRK