| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1380 |
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| Symbol | glyA |
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| ID | 6115620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1736230 |
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| End bp | 1737486 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632868 |
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| Product | serine hydroxymethyltransferase |
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| Protein accession | YP_001759767 |
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| Protein GI | 170725741 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.105108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000029211 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGAAAA AAGATATGAA TATCGCGGAC TTTGATCCAC AACTGTTTCA AGCGATTCAA
GATGAGACTC GTCGTCAAGA AGAGCACATC GAACTTATCG CTTCAGAAAA TTACACCAGT
CCACGTGTTC TGGAAGCTCA AGGTTCTCAG CTGACTAACA AGTACGCCGA AGGCTACCCT
GGTAAGCGTT ACTACGGCGG TTGTGAGCAT GTTGATATTG CTGAAGAGTT AGCGATTTCT
CGTGCTAAAG AGCTGTTTGG TGCTACCTAT GCTAACGTTC AACCACACTC TGGTTCACAA
GCAAACGCAG CTGTATTTAT GGCGCTGCTT GAAGGCGGTG ATACAGTACT AGGCATGAGC
CTAGCTCATG GTGGTCACCT GACTCACGGC TCACACGTTA GCTTCTCTGG TAAGCTTTAT
AACTCTGTTC AATATGGTAT TGACGAAACA ACAGGTAAGA TCGATTACGC TGAAGTTGAG
CGTCTTGCTG TTGAGCATAA GCCAAAGATG ATTATCGCAG GTTTCAGTGC TTACTCAGGT
ATCATTGATT GGGGCAAGTT CCGTGAGATT GCAGACAAAG TAGGTGCTTA CCTGTTTGTT
GATATGGCTC ACGTAGCGGG TCTAATCGCA GCGGGTATCT ATCCAAATCC GCTTCCACAT
GCCCATGTTG TGACAACCAC AACTCATAAG ACACTTGCAG GCCCTCGTGG TGGTCTAATT
CTTTCTGCAA TTGATGATGA AGCTATCTAC AAGAAGCTGA ACTCTGCCGT TTTCCCTGGT
GGCCAAGGTG GTCCTTTAAT GCATGTTATC GCTGCTAAAG CGGTTGCATT TAAAGAGGCG
TTAGAGCCTG AGTTCACCGC TTACCAAGAG CAGGTTGTAG TTAATGCGCA GGCGATGGCT
AAAACCTTTA TCGAACGTGG CTATGATGTT GTGTCGGGCG GTACAGATAA CCATCTGTTC
TTGCTTGATT TAATCAGCAA AGATATCACA GGTAAAGATG CTGATGCAGC GCTAGGTCTT
GCTAACATTA CTGTTAACAA AAACTCAGTA CCAAACGATC CGCGCTCACC ATTTGTGACC
TCAGGTCTGC GTATCGGTTC TCCAGCAATC ACTCGCCGTG GCTTTAAAGA AGCGCAAGCG
GTTGAACTGA CTAATTGGAT GTGTGATGTG CTAGATGACA TTACTAACGA AGGAACAATT
GAGCGTGTTA AGAACCAGGT TCTTGAATTG TGCGCTAAGT TCCCTGTTTA CGGTTAA
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| Protein sequence | MLKKDMNIAD FDPQLFQAIQ DETRRQEEHI ELIASENYTS PRVLEAQGSQ LTNKYAEGYP
GKRYYGGCEH VDIAEELAIS RAKELFGATY ANVQPHSGSQ ANAAVFMALL EGGDTVLGMS
LAHGGHLTHG SHVSFSGKLY NSVQYGIDET TGKIDYAEVE RLAVEHKPKM IIAGFSAYSG
IIDWGKFREI ADKVGAYLFV DMAHVAGLIA AGIYPNPLPH AHVVTTTTHK TLAGPRGGLI
LSAIDDEAIY KKLNSAVFPG GQGGPLMHVI AAKAVAFKEA LEPEFTAYQE QVVVNAQAMA
KTFIERGYDV VSGGTDNHLF LLDLISKDIT GKDADAALGL ANITVNKNSV PNDPRSPFVT
SGLRIGSPAI TRRGFKEAQA VELTNWMCDV LDDITNEGTI ERVKNQVLEL CAKFPVYG
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