| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1366 |
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| Symbol | |
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| ID | 6115606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1717633 |
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| End bp | 1720740 |
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| Gene Length | 3108 bp |
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| Protein Length | 1035 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632854 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001759753 |
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| Protein GI | 170725727 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0602713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00132005 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTAATTT CTGATATCTC AGTTAAACGT CCGGTTGTTG CTATCGTTTT AAGCTTGCTA
CTGTGTGTTT TTGGAGCGGT TTCTTTCTCA AAACTTGCTA TTCGTGAAAT GCCCGACGTT
GAAAGTCCAG TGGTCACTGT AATGACCACC TACGAAGGTG CGTCGGCAAC CATCATGGAG
AGCCAGATCA CCACGGCTCT GGAGGATGAA CTCACGGGGA TCAGCGGTAT CGATGAGATA
ACCTCAGTGA CTCGAAATGG GATGTCCCGT ATCACGATTA CTTTCGATCT CGACTGGGAT
CTGACCGAAG GGGTTAGTGA TGTTCGTGAT GCCGTAGCCC GTGCTCAGCG CCGTCTACCC
GATGAGGCCA ATGATCCAAT TGTATCTAAA GATAATGGCT CAGGTGAGCC CTCTATCTAC
ATCAATCTAA GCTCATCTGT GATGGACAGA ACTCAGCTTA CCGATTATGC CCAGCGTGTG
CTTGAAGACA GGTTTAGTCT GATAACTGGT GTGAGTTCGG TGAGTATTTC CGGTGGCTTG
TACAAGGTGA TGTACGTGCA GTTAAAGCCT GAGCTGATGG CGGGTCGTAA CGTCACTACC
GCTGATATTA TTGCTAGCCT GAAAAGGGAG AATGTGGAGA CTCCCGGTGG TGAGGTGCGT
AATGACACAA CTGTGATGAC TGTTCGCACC GCACGTCTTT ATAATCATGC AGAAGACTTT
GATTATCTTG TTGTGCGTAC GGCTAGTGAT GGTAGCCCTG TTTATTTGAA AGATGTGGCT
TCGGTGTTTA TTGGGGCTGA GAATGAAAAC TCTACCTTTA AAAGTGATGG TGTACCTAAT
TTAAGTTTAG GCATCATAGC CCAGTCAGAT GCGAACCCAC TTCTGGTTGC CAAGGCGGCG
CACAAAGAGG TGGAGCGTAT TCAACAGTTC CTGCCTGCGG GTACTGAGCT TGTGGTCGAC
TATGACTCAA CCGTATTTAT CGACCGTTCT ATTACAGAGG TATACAACAC GCTTTTCATC
ACTGGGGGAC TGGTGGTTTT GGTGCTCTAT ATCTTTATTG GTCAGGTGCG GGCAACACTC
ATTCCCGCTG TAACAGTGCC CGTCTCTTTG ATCTCTGCAT TTATTGCGGC AAATTTCTTT
GGTTTTTCGA TCAATTTATT GACCTTAATG GCGCTTATTC TCTCGATAGG TTTAGTCGTG
GATGATGCCA TTGTGGTGGT GGAGAATATA TTCCATCACC TTGAAAAGGG TGAGGAGCCG
CTACTTGCCG CCTATAAGGG CACGCGTGAA GTTGGCTTTG CCGTGGTGGC GACAACGGCC
GTTTTAGTGA TGGTGTTTCT GCCAATATCT TTTATGGAGG GGATGGTTGG TCGCTTATTT
ACTGAGTTTT CAGTGATGCT TGCTATGTCG GTTATCTTCT CCTCAATTGT GGCGCTGACC
TTAACGCCAG TGCTTGGCAG TAAGATGCTA AAAGCCAATG TGAAACCTAA TCGATTTAAC
CTATGGGTAG ACAAGTTATT CAATAAATTA GAGTTTGGTT ATCGCAAAAC GGTAGCTCAA
GCTGTTCGTT TTCGCTTTGC AGCCCCTTTA GTGATCATCT TATGCATCGC TGGTAGTGCT
CTTTTGATGA AAAGCGTGCC CTCGCAGTTG GCGCCCCAGG AAGATCGTGG CGTCATATTT
GCTTTTGTTA AAGGGGCGGA GGGAACCAGC TATAACCGGA TGACTGCCAA TATGGATATT
GTTGAGCAGA GGTTGATGCC CTTGCTTGGG CAAGGGGTGA TCAAATCTTT TAGCGTGCAA
GCCCCCGCTT TCGGCGGCCG CGCAGGCGAT CAGACTGGCT TTGTGATTAT GCAGCTGGAA
AGTTGGGAAG ATAGAAGCAT AAATGCTCAA CAAGCTCTAG GTATTGTGGC TAAAGCTTTA
AAAGGTATTC CAGATGTGAT GGTACGTCCT ATGCTGCCTG GATTTAGAGG ACAGTCGAGT
GAGCCTGTGC AGTTTGTGAT TGGTGGTTCA GATTATGATG AACTGTTTAA GTGGGCGCAG
GTGCTGCAAG AGGAGGCTAT TCATAGTCCT ATGCTGGAAG GCGCCGATCT CGACTATGCC
GAAACGACAC CTGAATTGGT GGTGAGTGTC GATAGAGAGC GGGCTGCAGA GCTTGGGATC
AGTGTTGCCG AGGTATCAGA GACTTTAGAG GTGATGCTTG GAGGGCGCAG TGAAACCACC
TTTGTCGATC GCGGTGAGGA GTATGATGTT TATCTAAGGG GTGATGAAAA TAGCTTTAAC
AGTATGTCGG ACTTAAGCCA GATCTATATG CGTTCTGCTA GAGGTGAACT GGTCTCGCTG
GACTCCATTA CCCATATTGA GGAGGTGGCG TCGGCAAATA AGCTCAGTCA TACCAATAAG
CAGAAGTCGA TCACCTTAAA AGCTAACTTA GGTGAAGGTT ATACCTTAGG CGAAGCACTT
GATTTCTTAG ATGCAAAGGC GATAGAGATC TTACCCAGTG ATATTTCGGT GAGCTATACG
GGGGAGTCCA AAGATTTTAA AGAGAACCAA AGCAGTGTCT TGGTCGTATT TGGTTTAGCA
CTTTTAGTGG CTTATCTAGT GCTGGCAGCC CAGTTTGAAA GTTTTATTAA CCCTATGGTG
GTGATGTTTA CTGTACCTAT GGGGGTATTT GGCGGATTCT TAGGACTTTA TCTAACGGGG
CAAGGGCTGA ATATCTATAG TCAGATAGGC ATGATAATGT TGATCGGTAT GGTGACTAAG
AACGGCATCT TAATTGTCGA GTTCGCTAAC CAGTTAAGAG ACAGGGGCTT GGAGCTAGAG
CAGGCAATTA TCGATGCGTC GGCTCGTCGC CTGCGACCTA TTCTGATGAC GGCATTTACT
ACCTTAGTGG GCGCTGTTCC ACTTATTTTA TCCACGGGAG CAGGCTCTGA GAGTCGTATT
GCAGTGGGAA CTGTTGTTTT CTTCGGTATG GCATTTGCGA CCTTTGTGAC TCTACTTGTT
ATCCCCGCCA TGTATCGACT CATTTCGGGG GCAACTCATT CACCGGGGTT TGTGGAAGCT
AAGCTTAATA GGGCGATATC AGCTCAACAG CTTGCTGAAC AAAAGTGA
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| Protein sequence | MLISDISVKR PVVAIVLSLL LCVFGAVSFS KLAIREMPDV ESPVVTVMTT YEGASATIME
SQITTALEDE LTGISGIDEI TSVTRNGMSR ITITFDLDWD LTEGVSDVRD AVARAQRRLP
DEANDPIVSK DNGSGEPSIY INLSSSVMDR TQLTDYAQRV LEDRFSLITG VSSVSISGGL
YKVMYVQLKP ELMAGRNVTT ADIIASLKRE NVETPGGEVR NDTTVMTVRT ARLYNHAEDF
DYLVVRTASD GSPVYLKDVA SVFIGAENEN STFKSDGVPN LSLGIIAQSD ANPLLVAKAA
HKEVERIQQF LPAGTELVVD YDSTVFIDRS ITEVYNTLFI TGGLVVLVLY IFIGQVRATL
IPAVTVPVSL ISAFIAANFF GFSINLLTLM ALILSIGLVV DDAIVVVENI FHHLEKGEEP
LLAAYKGTRE VGFAVVATTA VLVMVFLPIS FMEGMVGRLF TEFSVMLAMS VIFSSIVALT
LTPVLGSKML KANVKPNRFN LWVDKLFNKL EFGYRKTVAQ AVRFRFAAPL VIILCIAGSA
LLMKSVPSQL APQEDRGVIF AFVKGAEGTS YNRMTANMDI VEQRLMPLLG QGVIKSFSVQ
APAFGGRAGD QTGFVIMQLE SWEDRSINAQ QALGIVAKAL KGIPDVMVRP MLPGFRGQSS
EPVQFVIGGS DYDELFKWAQ VLQEEAIHSP MLEGADLDYA ETTPELVVSV DRERAAELGI
SVAEVSETLE VMLGGRSETT FVDRGEEYDV YLRGDENSFN SMSDLSQIYM RSARGELVSL
DSITHIEEVA SANKLSHTNK QKSITLKANL GEGYTLGEAL DFLDAKAIEI LPSDISVSYT
GESKDFKENQ SSVLVVFGLA LLVAYLVLAA QFESFINPMV VMFTVPMGVF GGFLGLYLTG
QGLNIYSQIG MIMLIGMVTK NGILIVEFAN QLRDRGLELE QAIIDASARR LRPILMTAFT
TLVGAVPLIL STGAGSESRI AVGTVVFFGM AFATFVTLLV IPAMYRLISG ATHSPGFVEA
KLNRAISAQQ LAEQK
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