Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1348 |
Symbol | |
ID | 6115588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1697240 |
End bp | 1698016 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641632836 |
Product | hypothetical protein |
Protein accession | YP_001759735 |
Protein GI | 170725709 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00722512 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000397841 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAGTACT CTTTACTTAG CACTGCCCTG TTATTTACCG TAAGCCTGAA CTGTTTTGCC CATTCAGAGG GTATAGAAGA GGCTGTAAGT AAGAAAAAAG TAAGCAGATT TCAGTGTGAT CAATTAGCGC CCACTAACAT CAAGCTCGAG TATGATGTGA TCGAATCAGA CCGTTTTGGT ACACCACAGG CTAGCTATTT GATGCGTTTA ATTAAAAACC AGCATCAAGT TATCTACCAA ACGTCACCAC AAACATTCGA AGCTTGGGAT AAAAATGGTG AATATATCCG TTATTTTCCC GAGGAGCGTC GCTCAATCAC CTACCGTCCA AGCGATCTAC GCTCGCTAAA TATCAGTTAT GATCTGTTAC AGCAGTTTCA CTTGGTCTCA CCTGAATTAA AATCACAGTT ACAAAGGGGT GAGAACACAC AGGCATCCTG CTTCCGGCTA GAGCAATATT CAGGTCTGCA AGGCGAGCAA AACATTAAAC TCAAGTGGAT TGAGTCTCTT GCTCTCCCCT ATCAATTCTC CATCACCCAT GCTCGAGGAA GCGTGCATTA TCAACTGCGT GATGCCAGCC CCATGACAAG CGAGAAGGTC AACACCATCA CACAAGGTTA TAACGATCTC GACTTTGCCG ATGTGGGCGA CAGTGAGTCC GATCCCTTTA TCGCTAAGAT GATCACCCAA GGTTTTATTC AGCACGGCAG TTCAGGGTTT TATGACACTG ATGGCAACTC TCTGTCAGGT GGAGATCACC ACGGCCATGC GCACTAA
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Protein sequence | MKYSLLSTAL LFTVSLNCFA HSEGIEEAVS KKKVSRFQCD QLAPTNIKLE YDVIESDRFG TPQASYLMRL IKNQHQVIYQ TSPQTFEAWD KNGEYIRYFP EERRSITYRP SDLRSLNISY DLLQQFHLVS PELKSQLQRG ENTQASCFRL EQYSGLQGEQ NIKLKWIESL ALPYQFSITH ARGSVHYQLR DASPMTSEKV NTITQGYNDL DFADVGDSES DPFIAKMITQ GFIQHGSSGF YDTDGNSLSG GDHHGHAH
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