| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1320 |
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| Symbol | trmB |
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| ID | 6115560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1673092 |
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| End bp | 1673808 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632808 |
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| Product | tRNA (guanine-N(7)-)-methyltransferase |
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| Protein accession | YP_001759707 |
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| Protein GI | 170725681 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
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| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.242246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGATG TAACAACGGC CGAGTTTAAT GAAGAAGGTA AGTACCTTCG CAAAGTGAGA
AGCTTTGTAT TAAGAGAGGG TCGCTTAACT AAAGGCCAAG CTACAGCTAT GGAGGAGCAA
TGGCCGTTAA TGGGTCTTGA TTACTCCCCT GAGCCACTGG ATCTGGCAGA AATTTTTGGG
CGCGAAGCCG ACACTGTATT AGAGATAGGT TTTGGCATGG GCGCATCGCT TGTTGAGATG
GCTAAAGCAT CACCAGAGCT TAACTTTATC GGCATAGAAG TGCATAAACC AGGTGTTGGA
GCTTGTTTGA GCGTTGCAGC TGAAGCTGGT GTGACTAATT TACGTGTATT TCACCACGAC
GCCATAGAAG TGTTAGAGAA CAGTATTGTT CCTAGTTCAC TTGCTCGCGT GCAGTTGTTC
TTCCCAGACC CTTGGCACAA GAAGCGTCAT CATAAGCGCC GTATTGTTCA GCCTGAGTTT
GCTCAGACTA TACGCAACTC TTTAAAGCTT GGTGGTGTGT TCCATCTGGC AACTGATTGG
GAAAATTATA GCGAGCATAT GTTGGAAGTG ATGAATGCAG CCCCCGGTTA TAAAAATCAA
TCGACAACCG GTGATGTTGT TGAGAGACCC GATCACCGCC CACTAACTAA GTTTGAGGCC
CGCGGTCACA GATTAGGTCA CGGTGTGTGG GATATTATGT TTGAGCGTAT AGATTAA
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| Protein sequence | MSDVTTAEFN EEGKYLRKVR SFVLREGRLT KGQATAMEEQ WPLMGLDYSP EPLDLAEIFG
READTVLEIG FGMGASLVEM AKASPELNFI GIEVHKPGVG ACLSVAAEAG VTNLRVFHHD
AIEVLENSIV PSSLARVQLF FPDPWHKKRH HKRRIVQPEF AQTIRNSLKL GGVFHLATDW
ENYSEHMLEV MNAAPGYKNQ STTGDVVERP DHRPLTKFEA RGHRLGHGVW DIMFERID
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