Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1315 |
Symbol | |
ID | 6115550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1666379 |
End bp | 1667686 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641632798 |
Product | glucose/galactose transporter |
Protein accession | YP_001759702 |
Protein GI | 170725676 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0258067 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATGA CATTAAATAG TGACAATAAG CGCAGCAGTA TTATCCCTAT GACAATAGTG GCTGTGCTAT TTTTCGTATT GGGATTCGCG ACCTGGCTCA ACGGCTCGCT GATGCCATAC CTGAAACAGA TCCTCCAGCT CACCCCACTT CAAGCCTCTC TTATCCTCTT CTCCTTTTAC ATTGCAGTGA CGTTTACTGC GCTTCCATCT GCATGGTTGA TTAGAAAAGT GGGTTATAAG AATGGCATGG CACTAGGCAT GGGCGTCATG ATGCTTGCGG GGTTGTTATT TATCCCAGCA GCTAAGACAC AGATATTTGC TCTGTTTCTT TTTGCTCAGC TTGTGATGGG GGCGGGGCAG ACGTTACTGC AAACTGCGGT TAACCCTTAT GTTGTTCGAA TTGGTCCTGA GGAGTCTGCC GCTGCACGTG TTAGTGTTAT GGGGATTCTG AATAAAGGGG CCGGCGTTAT TGCTCCTTTA GTATTCAGTG CGCTTATTCT TAATAGTTTT AAAGATAGAG TTGGCACTGA GTTAACATCT GCTCAGATCG ATGAGATGGC TAATGGGCTA GTACTTCCCT ATTTAGGCAT GGCGTTATTT ATCGGTTTAT TGGCATTAGT GGTTAAGAAG TCACCCCTAC CTGAGCTAAC CGATGAAGAT GAAGGCGAGC AAACAAATAA CAAGGGACAG ATTAAAGAGG CGCTCTCTCA CCCTAACCTT GCTTTTGGTG TTGTAGCGCT ATTCTTCTAT GTGGCTGTAG AAGTTATCGC GGGTGATACC ATAGGTACAT TTGCGCTTTC ATTAGGCATC GAAAGTTATG GTGTGATGAC CTCATATACC ATGATCTGTA TGGTACTAGG TTACACCTTA GGTATTTTGA CTATTCCGCG TTTTATCTCT CAACCAAAAG CGCTAATGAT CTCAGCTATT TTAGGTCTCA TTCTCACTAT AGGCATCGTC TTCGGTGACA ATGAGTCCTA CGCAATCGCT AATACCTTAT TAGTCCCTTT TGGTGGTGCT CAGCTGCCTG ATACCTTGCT AATGATCGCT TTCTTAGGTT TAGCTAATGC AATCGTATGG CCTGCAGTGT GGCCACTTGC ATTGTCAGGT ATGGGTAAAT TAACCAGTAC TGGTTCGGCA CTTCTGGTAA TGGGTATTGC TGGTGGTGCG TTTGGTCCGC TATTTTGGGG ATTAACTAGC TCAGTCTCAT CGCTAGGACA ACAGGGCGGG TATATGGTGA TGCTGCCTTG TTACCTATTT ATCCTGTTCT ATGCGGTTAA AGGCTATAAG ATGAAAAGCT GGAAGTAA
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Protein sequence | MEMTLNSDNK RSSIIPMTIV AVLFFVLGFA TWLNGSLMPY LKQILQLTPL QASLILFSFY IAVTFTALPS AWLIRKVGYK NGMALGMGVM MLAGLLFIPA AKTQIFALFL FAQLVMGAGQ TLLQTAVNPY VVRIGPEESA AARVSVMGIL NKGAGVIAPL VFSALILNSF KDRVGTELTS AQIDEMANGL VLPYLGMALF IGLLALVVKK SPLPELTDED EGEQTNNKGQ IKEALSHPNL AFGVVALFFY VAVEVIAGDT IGTFALSLGI ESYGVMTSYT MICMVLGYTL GILTIPRFIS QPKALMISAI LGLILTIGIV FGDNESYAIA NTLLVPFGGA QLPDTLLMIA FLGLANAIVW PAVWPLALSG MGKLTSTGSA LLVMGIAGGA FGPLFWGLTS SVSSLGQQGG YMVMLPCYLF ILFYAVKGYK MKSWK
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