| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1290 |
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| Symbol | |
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| ID | 6115525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1635239 |
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| End bp | 1636174 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632773 |
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| Product | riboflavin biosynthesis protein RibF |
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| Protein accession | YP_001759677 |
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| Protein GI | 170725651 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0196] FAD synthase |
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| TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000080021 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.371484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTAA TCCGCGGTAT AAACAATATT TTACCAGCAC ATCATGGCTG TGTTCTCACC
ATTGGAAACT TTGATGGAGT GCACCGTGGT CACGCTGAAG TTATCTCAAA GCTTGTAAAA
AAAGCGAGAC AACTGAATGT ACCTGCAACT TTGATGACGT TCGAGCCTCA ACCGCAAGAG
ATGTTTAGGG GAGATAGTGC CCCTGCAAGA CTCAGTACTT TGCGGGATAA AATTGTCTTG
CTTGAAGAGT TAGGCATCGA TCGCTTAGTG TGCATTAACT TCAATACTAA GTTTGCTGAG
ATGCCCGCCG AAGATTTTAT CGACAAGTTG TTGGTGAAGT CCCTTGGTGT TAAATACCTT
GTTGTCGGAG ATGATTTTTG CTTCGGTAAG GAGCGAATGG GTAATTTTGA TATGCTCAGG
ACTTCGGGTG AGAAACATCA GTTTGCTGTT GTCAGTACTC AAAGTTTTCT TCTTGGGGAT
AAACGTGTCA GCTCCACTGA AATTAGGGGC TTACTCGCTA AGGGGAAGAT GGAGCAGGCT
AGACGGTTAT TGGGACACCC TTTTACCTTG AGTGGGCGAG TCGCCCATGG TGAAGAGATT
GGGCGCACCA TAGGATTCCC TACGGCCAAC ATCGCTTTGA AACGTAAAGT GAGCCCTGTA
AGAGGGGTGT TTGCCGTCAA ACTGTATTGG GATGATAGTG ACGTATATGA TGGTGTCGCC
AATGTTGGGT TTAGGCCGAC GGTGAATGGG CAAAAGTGCC AGTTGGAAGT ACACCTTTTC
GATTTTGATG GTGACCTGTA TGGGCGCACT GTTGAGGTTG AGTTAGTAGC AAAAATTCGA
GATGAACAGC CTTTCCAGTC TCTGGAAGCG CTGAGAAAAC AAATTAACAA TGATGCAGAC
AAAGCCAAAG CCTTGCTTGG CTGTGATGCA GGTTAA
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| Protein sequence | MELIRGINNI LPAHHGCVLT IGNFDGVHRG HAEVISKLVK KARQLNVPAT LMTFEPQPQE
MFRGDSAPAR LSTLRDKIVL LEELGIDRLV CINFNTKFAE MPAEDFIDKL LVKSLGVKYL
VVGDDFCFGK ERMGNFDMLR TSGEKHQFAV VSTQSFLLGD KRVSSTEIRG LLAKGKMEQA
RRLLGHPFTL SGRVAHGEEI GRTIGFPTAN IALKRKVSPV RGVFAVKLYW DDSDVYDGVA
NVGFRPTVNG QKCQLEVHLF DFDGDLYGRT VEVELVAKIR DEQPFQSLEA LRKQINNDAD
KAKALLGCDA G
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