| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1289 |
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| Symbol | |
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| ID | 6115524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1633582 |
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| End bp | 1635141 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641632772 |
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| Product | integral membrane protein MviN |
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| Protein accession | YP_001759676 |
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| Protein GI | 170725650 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000157421 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.416972 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTAAAA AATTAGTTAA GTCAGGCATC ATTGTGAGTG TCATGACGTT AGTTTCCCGT
GTCATGGGAT TAATCAGAGA TGTCGTTATC GCTAATTTGA TGGGAGCCGG AAGTGGCGCC
GATGTTTTTA TCTTAGCGAA TAAAATCCCT AACTTTTTAA GACGTTTATT TGCCGAAGGG
GCTTTTTCAC AAGCCTTTGT TCCCGTATTT ACCGAATACC AGCAGAAACA TTCACCTGAC
GAGGTGCGTG AACTGATCTC AAAAGTAACG GGTACCTTAG GTATTTTGGT GAGTGTTGTC
ACCTTAGTTG GTGTAATTGG CTCCCCGTTA TTGATGGCAT TATTTGCCAA TGGCTGGTTT
GTCGCCTGGT TAAATGATGA GCCTAGTGGT GAGAAGTTTG AACTAGCGTC TTTGCTGCTC
AAGATCACTT TCCCCTATCT TTGGTTTATC ACGTTTACAG CCATGGCGGG CTCTATTCTT
AATACTCGTG GGCGATTCGC GGTGTCAGCA TTCACGCCCG TCTTTTTGAA TATTGCTATT
ATCTGCGCGG CGCTTTTTCT CTCACCAAAG CTTGAAAGTC CTGAATTGGG ACTCGCGCTT
GGGGTGTTTT TTGGTGGTTT AATTCAGTTT CTGTTTCAAA TTCCTTTCCT GCTGAACGAA
AGGGCGTTAG TTAAGCCATC TTGGGGTTGG CATTATCCTG GAGTGGTCAA GATCCGCACC
TTAATGATCC CGGCCATATT TGGGGTGTCG GTTTCACAAA TTAACCTTCT ATTTGATACT
TTTATTGCCA GTTATCTAAT GACCGGCTCC ATCAGCTGGC TTTACTACTC TGATCGACTA
TTAGAGTTTC CTTTAGGTCT GTTTGGTATT GCGATTGCCA CTGTCATCCT TCCTGCATTG
TCTAAAAAAC ATGTGAATGA TGAGGGGGGC GGGTTTGCAA AAACCATGGA TTGGGGCGTT
AAAGCTATCT TGTTACTCGG CATGCCCGCT ATGTGTGGCC TGATATTGTT AGCCAAGCCT
ATGCTGATGG TGCTGTTTAT GCGTGGTGCC TTTACAGTCG ATGATGTTGA AATGGCCTCT
TACAGCTTGA TGGCCTATGG CAGTGGCCTG TTAAGTTTCA TGCTTATCAA GGTATTAGCC
CCTGGGTATT ATTCGAGGCA AGATACTAAA ACACCTGTGC GTTATGGCAT TATTGCGATG
GTGAGTAACA TGGTATTTAA TGTGATCTTT GCTATTCCGT TTGGTTATGT TGGTTTAGCT
ATCGCCACTT CGCTCTCAGC ATTGCTCAAT GCAACTTTGC TATACCGAGG CTTGGCTAAA
GCGAATGTCT ATAAAGTCAG CAAACAAACA GGGCTCTTTT TTGGTAAAGC ACTGCTATCT
TGTATAGTGA TGGTCACCGT TTTAATTCAA CTTTTACCCA GTCAAGATAT TTGGTTGCAA
CAAGTGTTCA CACAGCGAGC CTTAACACTT TTAGCCTTGA TTGGTGCAGG CGTAGGGAGT
TACTTAATCA GCATGATAGT GCTGGGAATT CGTCCCTGGA AAATTAAAAC GGGTTTGTAA
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| Protein sequence | MSKKLVKSGI IVSVMTLVSR VMGLIRDVVI ANLMGAGSGA DVFILANKIP NFLRRLFAEG
AFSQAFVPVF TEYQQKHSPD EVRELISKVT GTLGILVSVV TLVGVIGSPL LMALFANGWF
VAWLNDEPSG EKFELASLLL KITFPYLWFI TFTAMAGSIL NTRGRFAVSA FTPVFLNIAI
ICAALFLSPK LESPELGLAL GVFFGGLIQF LFQIPFLLNE RALVKPSWGW HYPGVVKIRT
LMIPAIFGVS VSQINLLFDT FIASYLMTGS ISWLYYSDRL LEFPLGLFGI AIATVILPAL
SKKHVNDEGG GFAKTMDWGV KAILLLGMPA MCGLILLAKP MLMVLFMRGA FTVDDVEMAS
YSLMAYGSGL LSFMLIKVLA PGYYSRQDTK TPVRYGIIAM VSNMVFNVIF AIPFGYVGLA
IATSLSALLN ATLLYRGLAK ANVYKVSKQT GLFFGKALLS CIVMVTVLIQ LLPSQDIWLQ
QVFTQRALTL LALIGAGVGS YLISMIVLGI RPWKIKTGL
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