Gene Swoo_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1288 
SymbolrpsT 
ID6115523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1633070 
End bp1633336 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content46% 
IMG OID641632771 
Product30S ribosomal protein S20 
Protein accessionYP_001759675 
Protein GI170725649 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0268] Ribosomal protein S20 
TIGRFAM ID[TIGR00029] ribosomal protein S20 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.99661e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.326601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTAATA GCAAGTCTGC AAAGAAGCGC GCGCTTCAAT CTGAAAAGCG TCGTCAGCAT 
AACGCTAGCC GTCGCTCAAT GTTACGTTCA TACGTAAAGA AAGTTATCGC AGCTATTCAA
GCTGGCGATC ACGCTGCGGC GACTGAAGCA TTTAATGCTG CACAACCAAT CCTTGACCGT
ATGGCAACTA AAGGCCTTAT TCACAAGAAT AAAGCTGCCC GTCATAAGGC TCGCCTAAAC
ACAAGAATCA AAGCACTAGC TGCTTAA
 
Protein sequence
MANSKSAKKR ALQSEKRRQH NASRRSMLRS YVKKVIAAIQ AGDHAAATEA FNAAQPILDR 
MATKGLIHKN KAARHKARLN TRIKALAA