| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1281 |
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| Symbol | |
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| ID | 6115516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1622751 |
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| End bp | 1623854 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632764 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001759668 |
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| Protein GI | 170725642 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000128179 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0324976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACA ATACATTAAA AGCAGTTTTG CTGACATCGA TGCTCCCTTT TGCTGCTAAT
GCAGCTCAAG AGCTGACCCC ATGGTATGTG GGTGGCGGTG TTGGTGTTAA CGATTATGAA
CCAAGCTGCG ATCTAAAAAC CATGAAAGTT TGTGGTAAAG ATGATCCTTA CGCTTGGGAC
GTATTTGGCG GTTACCTATT TAACGACTAT TTTGGTGTTG AACTAGGTTA CCGTGATCTT
GGTCGCGGAG AGTGGACAGA CTATGCCAAC AAGCGTAACG ATGTTGGTGC CAAAGGTATG
ACCCTTGGTC TAGTTGGTTT TATGCCACTT TCACAACGCT GGAGTCTATC GGCTGAAGCT
GGTGCGATGA ACTACCTGCT ATCAAACAAC AAGCAGTATG GCACTGAGTA CTATAGTGAC
AGCGGCGTAG CACCTTACTT TGGTGTTGGT GTCGGTTATA ACATCACTGA GAATTTGAAG
CTACAGGCTA AATACCGCCG CTATGAAAAC TTAGAAGATG ACAAGTGGAA TACACTTGAC
ATGGAAAGCA ACTATTGGGG ATTAGAGCTT AGTTACCGTT TCGGTCGTAC TGCTCCAGCC
GCAGTGGTCG CTCCAGTCGT TGCAGCACCA GTCGATTCAG ATAATGACGG TGTAACTGAC
GATATGGACC AATGTCCAAA TACACCTTCA ACTCATCAAG TTGATGGTAA TGGTTGTACT
ATCTACAAAG AGACAACTGA GCAGCGTGAT GTTGGCTCGA TTCAGTTTGC TAACAACTCA
TCAGTGGTTA AGAACGAATC TTACCAGCAG ATTGAGAAGC TAGCGAACTA CATGAACCAG
CACCCTAAAT CGACAGTGCT GATCTCAGGT CATGCCTCTG ATGTAGGTAA AGCTGAGTAC
AACATGATGC TATCTGACAA GCGTGCTAAC GCCGTTGCTA AGATATTGGT TGAAAAATAT
GGTATTGCGC AAGATCGCGT AGAAGCGAAA GGCTTCGGTA TCACTCAACC TATCATCGAA
GGTAGCAGCC CAGCTGCAAA CAAGGCTAAC CGCCGTATCG AAGCTCACGT CACAGGCGTG
AAAAAAGAAG CCCTAATCAA GTAA
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| Protein sequence | MMNNTLKAVL LTSMLPFAAN AAQELTPWYV GGGVGVNDYE PSCDLKTMKV CGKDDPYAWD
VFGGYLFNDY FGVELGYRDL GRGEWTDYAN KRNDVGAKGM TLGLVGFMPL SQRWSLSAEA
GAMNYLLSNN KQYGTEYYSD SGVAPYFGVG VGYNITENLK LQAKYRRYEN LEDDKWNTLD
MESNYWGLEL SYRFGRTAPA AVVAPVVAAP VDSDNDGVTD DMDQCPNTPS THQVDGNGCT
IYKETTEQRD VGSIQFANNS SVVKNESYQQ IEKLANYMNQ HPKSTVLISG HASDVGKAEY
NMMLSDKRAN AVAKILVEKY GIAQDRVEAK GFGITQPIIE GSSPAANKAN RRIEAHVTGV
KKEALIK
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