| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1272 |
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| Symbol | |
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| ID | 6115507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1612350 |
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| End bp | 1613630 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632755 |
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| Product | threonine synthase |
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| Protein accession | YP_001759659 |
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| Protein GI | 170725633 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0498] Threonine synthase |
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| TIGRFAM ID | [TIGR00260] threonine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0268749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACTGT ATAACTTAAA ACACCCCTCA CAAGTGGTTA ATTTTGCCCA AGCGCTCACG
TTAGGCCTAG GTAAAGACAG AGGCTTGTTT TTTCCTAAAT CTATTCCTGT ATTAGAGGAT
ATGGACTCGC TATTGGCACT GCCGTTTGTC GAGCGTAGCA AAAAGGTATT AGGTGCTTGG
CTCGCCAGTG AGATAGGGCA GGAGAGAGTT GACTCCCTCG TTGAGAAAGC TTTTAACTTC
GACCTTAAAC TGGCTAAAGC TGATGAGCAT CGTTACTGCC TAGAGCTGTT TCATGGCCCT
ACCTTAGCCT TTAAAGATTT TGGAGCCCGC TTTATGGCCC AGTGTCTGAA TGAGCTTGCG
GGTGATGACA AAATTAATAT ATTGACGGCC ACCTCCGGTG ATACTGGCGC TGCTGTTGCA
GATGCTTTCT TTGGGCTGGA TAAGATCCAA GTTGTGGTGT TATACCCTAA AGGTAAGATA
AGTGTTCTTC AGGAGAAGAT GTTTACCACG CTAGGGGACA ATATTCACAC TGTGTCGGTT
GAGTCAGATT TTGATGCTTG TCAGGACTTA GTTAAGCGAG CATTTGAAGA CAGTGATGTA
CGTGATGGTT TGCACTTAAA CTCTGCAAAT TCAATTAACA TCAGCCGTTT GCTAGCGCAG
ATCTGTTACT ACTTTGAAGC AGTTGCTCAG TTTAAGCGCG AGCACAAGCA AGATCCTGTC
ATCGCGGTTC CAAGTGGTAA TTTTGGTAAC CTAACTGCGG GCTTATTTGC TAAGGCGATG
GGGTTACCTG TAGCAAGATT TGTTGCTGCA ACCAATAGTA ACGATACCGT GCCTCGCTAT
CTTGATAAGG GGGACTGGTT GCCACATGCT ACGGTTGCCA CTATGTCTAA TGCAATGGAT
GTATCTGAGC CAAGTAACTG GCCAAGGGTT GAGGCGGTAG TTGAGAAGAT GGGGTGGTCG
CTAGCCGACA TTACTGGTGT TGCTTTATCG GAGCAGGATA CTTCAAAGGC GCTGAGTGAG
CTGAATCGTC AAGGTTACCT CTGTGAGCCC CATGCTGCCA TTGCTGCACA GGCGCTGAGT
CTAACTCAGT CTGATGGCGA GAGGGGGATA TTCTTAGGGA CAGCGCATCC TGCTAAGTTT
AAGGATGTGG TCGATAGAGA GCTTGAGGTC AATCTACCTC TACCTCAAGA ACTTGCAGCG
GTGGAGAAGA AGGATATCTT GTCTGTCACA TTGCCTGCAG ATTTTGGGCA ACTCAAACAA
CACCTTTTCA AGATTCTCTA G
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| Protein sequence | MELYNLKHPS QVVNFAQALT LGLGKDRGLF FPKSIPVLED MDSLLALPFV ERSKKVLGAW
LASEIGQERV DSLVEKAFNF DLKLAKADEH RYCLELFHGP TLAFKDFGAR FMAQCLNELA
GDDKINILTA TSGDTGAAVA DAFFGLDKIQ VVVLYPKGKI SVLQEKMFTT LGDNIHTVSV
ESDFDACQDL VKRAFEDSDV RDGLHLNSAN SINISRLLAQ ICYYFEAVAQ FKREHKQDPV
IAVPSGNFGN LTAGLFAKAM GLPVARFVAA TNSNDTVPRY LDKGDWLPHA TVATMSNAMD
VSEPSNWPRV EAVVEKMGWS LADITGVALS EQDTSKALSE LNRQGYLCEP HAAIAAQALS
LTQSDGERGI FLGTAHPAKF KDVVDRELEV NLPLPQELAA VEKKDILSVT LPADFGQLKQ
HLFKIL
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