| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1270 |
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| Symbol | thrA |
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| ID | 6115505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1608836 |
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| End bp | 1611301 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632753 |
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| Product | bifunctional aspartokinase I/homeserine dehydrogenase I |
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| Protein accession | YP_001759657 |
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| Protein GI | 170725631 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase
[COG0527] Aspartokinases |
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| TIGRFAM ID | [TIGR00657] aspartate kinase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.739227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00698149 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGTAA TGAAGTTTGG CGGTACCTCG CTGGCTAATT GGCAACGATT TAGTGCGGCA
GCGGCCATTG TCGCTGATAC AGCAAAAGAT GAGTCCGTGG CAGTGGTATT ATCGGCACCA
GCAACAGTGA CAAATGGGTT GCTGGAGATG GTTGACCTTG CAATTCAAGG TGGCGATTTT
AAGTCGGTAC TAGCGAATGT TGAGCGCGTA TTTACGGCAT TGTATCAAGA TGCTAGCTCC
ACACTGTCAC CTTCTCAGCT ATCTCTGCTT ATGGATAAGT TAACTGAGCA ACTTAGCTTC
TGGGAAAAGA AGCTGCTTGG TATCAATTTG CTCAATGAGT GCCCCGATTT TGTTCGCGCT
GAAGTTTTAG TTTGCGGCGA GAAGCTCTCT TCTGCATTGA TGGTCGAATT GATGTTGACC
AAGGAGATAA GTTCAGATTT ACTTGTACCT CAAGCCTTGT TTGTTGCCGA TGGCGAGCCA
CTCGAGTCGG TCGTTGATAT TGAGTCAAGT AAAGCTAAAT TCAAACAAGT GCCGCTGGAG
AGTAAACGAG TTTGGGTGAT GCCAGGCTTT ACCGCTGGAG ACCGGGAGGG AAGGATAGTG
ACTCTTGGGC GTAATGGCTC AGATTATTCT GCAGCGGTTT TGTCAGCCTG TATCGATGCC
AGTTGCTGCG AGATCTGGAC TGATGTTGAC GGGGTTTACA ATACTGATCC ACGTGTTGTT
GCTGATGCAA AACTTCTCTC TCAGCTGAGT TACCAAGAGG CGATGGAGCT CTCCTATTTT
GGCGCAAAAG TACTTCACCC TAAGACTATC TCTCCTATTG CCCGCTACCA CATCCCTTGT
TATATCCGTA ACAGTTTTAA CCCTTCTGCC ATAGGCACCT TAGTCTCAAA TGAGGCGGAT
AAAAGCGGCT TGAATGTGAA GGCCATCTCT AACCTTGATG CGCAGACGAT GTTTGATATC
TCAGGCCCTG GGATGAAAGG CATGGTCGGG ATGGCGAGTC GGACGCTAGG TGCCATCTCC
CGTGCTGGTG TCTCAATCTC TCTTATTACT CAAAGCTCTT CTGAGTACAG CATCAGTTTC
TGTATTGCGA CTCAAGATGC TCATAAAGCA AAAGCTTCAT TGGAGTTGGA GTTCGAGTTA
GAGCTGAAAA ATGAGATCTT AGAGCCGATT GAGATGCGAG ATAACTTAGC TATCGTTTCA
TTGATTGGAG ATGGCATGCG CACCCATAAA GGGGTTGCTG GCAAATTTTT TCAAGCATTG
GCGCAAGCGT CGGTGAACAT CGTTGCGATA GCACAGGGAT CTTCGGAGCG TTCCATCTCG
ACCGTTATCG AACAGCGTAA GATTAAGCAT GCTATCTCAG CCTGTCACCA AAGCTTCTTT
GATGTACAGC ACTACCTAGA CGTATTTCTT GTGGGGTGTG GCAATGTTGG TGCAGGTCTG
CTTGAGCAGA TCAAACAGCA AACTCAGATG TTAAAGCAGG AGCATATCAC TATTCGCGTG
TGTGGTATCG CTAACTCACG CCACATGCTT CTTGATGCCG AAGGCGTCGA CCTGAACAGC
TGGCAAGGGC TGCTCAGTGA TAGCCAAACT GAGTGCGATC TCGACTTTAT GTTGCAGTGG
GCCAAAGAGC AGCAGCTACT TAACCCTGTG CTGGTGGATT GTACCTCTAG TGAGTATGTG
TCCAATAAAT ATCTGGATGT GATGAATGCG GGTCTGCATG TCGTGACGCC AAACAAGAAA
TCAAATACTC GTGATATTGA GTACTACCGT GCACTGCGCC AAACCGCCCT TAAGCAGCGT
AGACAGTTTC TTTATGAAAC CACTGTTGGT GCTGGGCTAC CTGTTATTGA TAACCTTAAA
AAGTTACTGT TTGCTGGTGA TAAGCTGCTT AAGTTTAATG GCATATTATC GGGTTCTCTG
TCATATATTT TTGGCATGCT CGATGAGGGG ATGACACTCT CTGAGGCGAC AGGAATTGCG
CGAGATAAAT GTTTTACAGA GCCCGATCCT AGAGACGATC TCAGTGGCAT GGACGTTGCT
CGCAAGGTGT TGATTTTAGC CCGTGAAGTA GGATTGGAGC TGGAGCTCAG TGACATCACT
ATTGAATCAG TGTTACCTGA TGACTTTGAT GCCAGTGGAG ATGTAGAGAC CTTTATGGCT
AACTTACCTA AGCTGGATCA GCAGATTGCA CAGTGGGTTG AGAAAGCGCG CTCAGAAGGA
AAGGTACTGC GTTATTTGGG GCAAATTGAC GATGATGGAT GCCGCGTCAA GATAGCTGAA
GTGGATGCTG ATGACCCTCT TTATAGCGTC AAAGGTGGTG AAAATGCGTT GGCTTTCTAT
AGCCGTTATT ATCAACCAAT TCCGTTCGTA CTTCGCGGCT ATGGTGCGGG TACCGATGTG
ACAGCTGCTG GTGCATTTGC TGATCTGCTT AGAACATTAA ACTGGACTCG GGAGATGAGT
GCATGA
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| Protein sequence | MKVMKFGGTS LANWQRFSAA AAIVADTAKD ESVAVVLSAP ATVTNGLLEM VDLAIQGGDF
KSVLANVERV FTALYQDASS TLSPSQLSLL MDKLTEQLSF WEKKLLGINL LNECPDFVRA
EVLVCGEKLS SALMVELMLT KEISSDLLVP QALFVADGEP LESVVDIESS KAKFKQVPLE
SKRVWVMPGF TAGDREGRIV TLGRNGSDYS AAVLSACIDA SCCEIWTDVD GVYNTDPRVV
ADAKLLSQLS YQEAMELSYF GAKVLHPKTI SPIARYHIPC YIRNSFNPSA IGTLVSNEAD
KSGLNVKAIS NLDAQTMFDI SGPGMKGMVG MASRTLGAIS RAGVSISLIT QSSSEYSISF
CIATQDAHKA KASLELEFEL ELKNEILEPI EMRDNLAIVS LIGDGMRTHK GVAGKFFQAL
AQASVNIVAI AQGSSERSIS TVIEQRKIKH AISACHQSFF DVQHYLDVFL VGCGNVGAGL
LEQIKQQTQM LKQEHITIRV CGIANSRHML LDAEGVDLNS WQGLLSDSQT ECDLDFMLQW
AKEQQLLNPV LVDCTSSEYV SNKYLDVMNA GLHVVTPNKK SNTRDIEYYR ALRQTALKQR
RQFLYETTVG AGLPVIDNLK KLLFAGDKLL KFNGILSGSL SYIFGMLDEG MTLSEATGIA
RDKCFTEPDP RDDLSGMDVA RKVLILAREV GLELELSDIT IESVLPDDFD ASGDVETFMA
NLPKLDQQIA QWVEKARSEG KVLRYLGQID DDGCRVKIAE VDADDPLYSV KGGENALAFY
SRYYQPIPFV LRGYGAGTDV TAAGAFADLL RTLNWTREMS A
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