| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1267 |
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| Symbol | |
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| ID | 6115502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1606665 |
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| End bp | 1606943 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641632750 |
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| Product | Trp operon repressor |
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| Protein accession | YP_001759654 |
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| Protein GI | 170725628 |
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| COG category | [K] Transcription |
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| COG ID | [COG2973] Trp operon repressor |
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| TIGRFAM ID | [TIGR01321] trp operon repressor, proteobacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.885699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00351193 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGAGCTG AGTGGGATTG TGTATTAGAA AAAGTCGTGA GTCATCAAGA TCACAACGCG
CTAATTGAGC TATTTGAACT CCTGTTAACT GAAGAGGAGC GAAGTGCTAT TGCGGGCAGA
CTAAAAGTGT TTCAGGTGCT ACTTCTTGGT GAGATGAGTC AACGTCAGAT AGCTGCTGAG
TATAAGATAA GTATTGCTAC TATCACACGT TGCTCTAACT ATCTAAAACA TATGTCTCCC
GAGCAGAGAG AGAAGATTAA AACACTTATC TTAGGTTAA
|
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| Protein sequence | MRAEWDCVLE KVVSHQDHNA LIELFELLLT EEERSAIAGR LKVFQVLLLG EMSQRQIAAE
YKISIATITR CSNYLKHMSP EQREKIKTLI LG
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