Gene Swoo_1266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1266 
Symbol 
ID6115501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1605935 
End bp1606396 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content42% 
IMG OID641632749 
Productcytochrome c prime 
Protein accessionYP_001759653 
Protein GI170725627 
COG category[C] Energy production and conversion 
COG ID[COG3909] Cytochrome c556 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00355907 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAAGA ATGCAAAAAT GGCCATCTTG GCAGTTGTTA CCAGTACAGT ACTAGCGACA 
AGCGTACAGG CAGGTAATTT CAAAAAGACC GATGATGCAA TTGAATACCG TCAATCAGCA
TTTAGCTTAC TAGCCTACAA TTTTGGTGAT ATGGGCGCGA TGTTAAAAGG CAAGAAACCG
TTTGATGCTG AGGTGTTTGC AATGCGAGCA GACAACGTTG CGGCACTTTC AAAGCTTCCT
TTAGAGGGCT TTACACCAGG TTCTGATAAA GGTGACACTG AAGCACTGCC TAAAGTCTGG
ACTGAAAAAG CTGATTTTGA TGCCAAGATG CTTCAGCTTC AAAAAGATTC AGCAGCCCTA
GCTATTGCAG CAAAAGCTGA CGATAAAAAA GCACTGAAGC AAGCCTTTAT GGCAACAGCT
AAAAATTGTA AAGGTTGTCA CGATAGCTAC AAGAAAGACT AA
 
Protein sequence
MNKNAKMAIL AVVTSTVLAT SVQAGNFKKT DDAIEYRQSA FSLLAYNFGD MGAMLKGKKP 
FDAEVFAMRA DNVAALSKLP LEGFTPGSDK GDTEALPKVW TEKADFDAKM LQLQKDSAAL
AIAAKADDKK ALKQAFMATA KNCKGCHDSY KKD