Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1265 |
Symbol | |
ID | 6115500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1605208 |
End bp | 1605876 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641632748 |
Product | cytochrome B561 |
Protein accession | YP_001759652 |
Protein GI | 170725626 |
COG category | [C] Energy production and conversion |
COG ID | [COG3658] Cytochrome b |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00348769 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACAATA AAATTAAAGT TTGGGATCTT CCTACACGGA TTTTTCACTG GGGCATGATT GTTTTATTAG GAGGGCTCTG GTGGACGGCT GATGCTGGAG AGATGGATTG GCATCAAGTT CTTGCCTATT CTTTAATGGT GTTTATTGTT TTTAGGCTTA TCTGGGGCGT TGTTGGAAGC GATACTTCGC GTTTTAGTCA TTTTATTAAA CCCCCTAAAG CGGTATTGGA TTATATGAAG CTGACTAAGG AGCAAGGTGT CTCCTCTAGT ATTGGTCATA ACCCATTAGG TGGGTATATG GTGATTGCCT TGATTATGCT TGTTTCAGCT CAGCTGACCA CAGGTTTATT TGCAACTGAT GAGATATTTA CTGAAGGCCC ACTGTACTCT TTGGTATCGA GTGAGACCGG CTCCTTGATG AGCTGGCTAC ATAAAAAAAT CTTCTATGTG ATGTTGGGCT TTGCTTCTAT CCATGTATTG GCTGTTGTTT ACCATGGCCT TAAAGGTGAT AAGTTAATCA CTCCTATGAT CACCGGTTAC AAACAGGTAT CTGAAGCAAG CGGATTGGAG TTAAAGTTTA AACCTGCTCT GATGGCTTTC TTGCTGGTGG CCCTGTTAGC GGGCTTGGTT GGAAATTACT TAATTAAACC TGTTGTGGGA ATGCTGTAG
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Protein sequence | MNNKIKVWDL PTRIFHWGMI VLLGGLWWTA DAGEMDWHQV LAYSLMVFIV FRLIWGVVGS DTSRFSHFIK PPKAVLDYMK LTKEQGVSSS IGHNPLGGYM VIALIMLVSA QLTTGLFATD EIFTEGPLYS LVSSETGSLM SWLHKKIFYV MLGFASIHVL AVVYHGLKGD KLITPMITGY KQVSEASGLE LKFKPALMAF LLVALLAGLV GNYLIKPVVG ML
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