Gene Swoo_1265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1265 
Symbol 
ID6115500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1605208 
End bp1605876 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content42% 
IMG OID641632748 
Productcytochrome B561 
Protein accessionYP_001759652 
Protein GI170725626 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00348769 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAATA AAATTAAAGT TTGGGATCTT CCTACACGGA TTTTTCACTG GGGCATGATT 
GTTTTATTAG GAGGGCTCTG GTGGACGGCT GATGCTGGAG AGATGGATTG GCATCAAGTT
CTTGCCTATT CTTTAATGGT GTTTATTGTT TTTAGGCTTA TCTGGGGCGT TGTTGGAAGC
GATACTTCGC GTTTTAGTCA TTTTATTAAA CCCCCTAAAG CGGTATTGGA TTATATGAAG
CTGACTAAGG AGCAAGGTGT CTCCTCTAGT ATTGGTCATA ACCCATTAGG TGGGTATATG
GTGATTGCCT TGATTATGCT TGTTTCAGCT CAGCTGACCA CAGGTTTATT TGCAACTGAT
GAGATATTTA CTGAAGGCCC ACTGTACTCT TTGGTATCGA GTGAGACCGG CTCCTTGATG
AGCTGGCTAC ATAAAAAAAT CTTCTATGTG ATGTTGGGCT TTGCTTCTAT CCATGTATTG
GCTGTTGTTT ACCATGGCCT TAAAGGTGAT AAGTTAATCA CTCCTATGAT CACCGGTTAC
AAACAGGTAT CTGAAGCAAG CGGATTGGAG TTAAAGTTTA AACCTGCTCT GATGGCTTTC
TTGCTGGTGG CCCTGTTAGC GGGCTTGGTT GGAAATTACT TAATTAAACC TGTTGTGGGA
ATGCTGTAG
 
Protein sequence
MNNKIKVWDL PTRIFHWGMI VLLGGLWWTA DAGEMDWHQV LAYSLMVFIV FRLIWGVVGS 
DTSRFSHFIK PPKAVLDYMK LTKEQGVSSS IGHNPLGGYM VIALIMLVSA QLTTGLFATD
EIFTEGPLYS LVSSETGSLM SWLHKKIFYV MLGFASIHVL AVVYHGLKGD KLITPMITGY
KQVSEASGLE LKFKPALMAF LLVALLAGLV GNYLIKPVVG ML