Gene Swoo_1256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1256 
SymboltrmD 
ID6115491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1593803 
End bp1594549 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content47% 
IMG OID641632739 
ProducttRNA (guanine-N(1)-)-methyltransferase 
Protein accessionYP_001759643 
Protein GI170725617 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0336] tRNA-(guanine-N1)-methyltransferase 
TIGRFAM ID[TIGR00088] tRNA (guanine-N1)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.23136e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value5.64975e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGGTTAG GGGTTGTAAC CCTGTTTCCA GAGATGTTTC GTGCCGTCAC AGACTTTGGA 
GTAACGGGTC GGGCCGTTAA CAAGGGCCTG TTAGAGTTGC AAACGTGGAA TCCAAGAGAT
TTCACCCATG ATAAACATAA GACAGTGGAT GATCGCCCCT ATGGTGGTGG CCCTGGCATG
TTGATGATGG TGCAACCTTT ACGCGACGCT ATTCATGCTG CGAAAGCGGC AGCTGGCGAT
AGTGCGAAGG TGATTTATCT CTCTCCTCAG GGGCGCAAGC TGACACAGCA AGGCGTCGAA
GAGTTAGCTA AATCGGACAG TTTGATTTTG GTATGTGGTC GATACGAAGG TGTTGATGAG
CGTATTATTC AAACTGAAGT GGATGAGGAG TGGTCAATTG GAGATTACGT GCTTTCGGGC
GGTGAACTTC CAGCGATGAC TCTTATCGAT TCAGTATCAA GATTGGTACC GGGCGTACTC
GGTAAGCAAG CTTCGGCAGA GCAGGACTCC TTCTCTGACG GTTTATTGGA TTGTCCCCAC
TATACTCGCC CTGAAACCTT GGATGGTTTA GATGTACCAG CAGTCTTGTT AAGTGGTAAC
CACGAACATA TTAGACGCTG GCGTCTACAA CAAAGTCTCG GTAGAACTTT GTTAAGGCGA
CCAGAATTAT TAGAAAATCT AGCTCTGACT GACGAACAAA CGAAGCTTTT AGCTCAGTTT
GTTGATTCAA CAAATGAGTG TGGATAG
 
Protein sequence
MWLGVVTLFP EMFRAVTDFG VTGRAVNKGL LELQTWNPRD FTHDKHKTVD DRPYGGGPGM 
LMMVQPLRDA IHAAKAAAGD SAKVIYLSPQ GRKLTQQGVE ELAKSDSLIL VCGRYEGVDE
RIIQTEVDEE WSIGDYVLSG GELPAMTLID SVSRLVPGVL GKQASAEQDS FSDGLLDCPH
YTRPETLDGL DVPAVLLSGN HEHIRRWRLQ QSLGRTLLRR PELLENLALT DEQTKLLAQF
VDSTNECG