Gene Swoo_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1254 
SymbolrpsP 
ID6115489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1592985 
End bp1593236 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content48% 
IMG OID641632737 
Product30S ribosomal protein S16 
Protein accessionYP_001759641 
Protein GI170725615 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0228] Ribosomal protein S16 
TIGRFAM ID[TIGR00002] ribosomal protein S16 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.03035e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.50288e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTACCA TTCGTTTAGC TCGTGGCGGC GCAAAAAAGC GTCCATTTTA TAACATCGTA 
GTTGCTGACA GCCGTAATGC CCGTGATGGT CGTTTCATTG AGCGTGTTGG TTTCTTTAAC
CCAATGGCTC GTGGCCAGGA AGAGACTCTA CGTCTTGACC TAGACCGTGT TGAGCACTGG
GTAACTAACG GTGCTGGAAC ATCTGAGCGT GTTGCAAAGT TGATCAAAGA CGCTCGTAAA
GCTGCTGCTT AA
 
Protein sequence
MVTIRLARGG AKKRPFYNIV VADSRNARDG RFIERVGFFN PMARGQEETL RLDLDRVEHW 
VTNGAGTSER VAKLIKDARK AAA