Gene Swoo_1252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1252 
Symbol 
ID6115487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1590311 
End bp1591099 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content47% 
IMG OID641632735 
Productcytochrome c assembly protein 
Protein accessionYP_001759639 
Protein GI170725613 
COG category[R] General function prediction only 
COG ID[COG4137] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.44074e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.56209e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTATAT TTTCCGCTTC AGCCATGTTT TTTTACTGCA TCGCCTTAGT GCTAGTGGTG 
AGCCGTCTGT TTCATAGTGA CGGTCCTAAC CGCCGCCTAG TTGCTGCAGT TGCTGCTATT
GCCGTCGTCT TACACGCAGC AGCGCTTTCA CAAGCTATGT TCACCGGTGA CGGGCAGAAC
TTCAGCCTAA CCAATGTGAT CTCACTGGTT AACTGGATTA TCGCCTTTAG TTTTACAGTG
CTGCTCTTCA GACTCAAGAT GATTGTGGTC GTGCCTGTGG TTTACGCCTG CTCTATCATC
TCTGTCGCCC TACTTTGGTT AGTACCGCCA GAATATATCA CCCATTTTGA GATCCACCCG
GATATCTTAG TGCATGTGGT GCTTTCGCTT ATGGCCTACA GCGCCTTGAT GATCGCGGCA
TTATATGCCA TTCAACTTGC CATCATTCAA AATAAGTTAA AGAGCAAGAA GCTGATTATG
AACCCAGCGA TGCCACCTTT AATGACCGTT GAGAAACAGC TTTACCACCT AGTGATTGTC
GGAGTTATCC TGCTTAGTTT ATCGCTCGCC ACAGGCTTTA TCTTCCTCGA CGATATGTTT
GAAGAGGGCA AAGGCCATAA AGCGGTACTC TCAATCATCG CTTGGTTTAC CTATATTGCC
ATGCTTGCAC AGCAGTATTG GGTGGGCTGT AAAATAAGAA CCGCCGTTAT CTATACCCTT
TCAGGCGCGA CACTATTGTC ACTTGCCTAC TTTGGCGCAC GAATCGTCAA AGAGCTGATT
TTAGGCTAA
 
Protein sequence
MVIFSASAMF FYCIALVLVV SRLFHSDGPN RRLVAAVAAI AVVLHAAALS QAMFTGDGQN 
FSLTNVISLV NWIIAFSFTV LLFRLKMIVV VPVVYACSII SVALLWLVPP EYITHFEIHP
DILVHVVLSL MAYSALMIAA LYAIQLAIIQ NKLKSKKLIM NPAMPPLMTV EKQLYHLVIV
GVILLSLSLA TGFIFLDDMF EEGKGHKAVL SIIAWFTYIA MLAQQYWVGC KIRTAVIYTL
SGATLLSLAY FGARIVKELI LG