Gene Swoo_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1247 
SymbolacpS 
ID6115482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1585327 
End bp1585725 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content47% 
IMG OID641632730 
Product4'-phosphopantetheinyl transferase 
Protein accessionYP_001759634 
Protein GI170725608 
COG category[I] Lipid transport and metabolism 
COG ID[COG0736] Phosphopantetheinyl transferase (holo-ACP synthase) 
TIGRFAM ID[TIGR00516] holo-[acyl-carrier-protein] synthase
[TIGR00556] phosphopantethiene--protein transferase domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.9749e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.06801e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGATTGTTG GTTTGGGTAC CGATATTGCT GAGATTGAAC GTATTGAGCA GAAGGTGCCT 
GCTGCAGGTG ATATTAAGGG TTTAGAAAGT TGCCGTTTAG CTAAACGCGT GCTCACCGAG
CCTGAAATGG CAATCTTTAT CGCTTCAAAA CAACCTGCTC GGTATCTGGC GAAACGCTTT
GCCGCTAAAG AAGCTGCGGC TAAAGCGTTA GGTACAGGTA TTGGCCGCGG AGTCTCTTTT
CAACATATCG AAATTAGCAA TGATACTAAT GGTGCGCCAT TAATTAGCTT CAACGGTGGA
GCGGCAGATA GGTTGGCATC TCTTGGTGGT GCTCGCGCCC ATATCTCAAT TGCCGATGAG
AAACATTACG CCACAGCTAC CGTCATTCTT GAGTCGTGA
 
Protein sequence
MIVGLGTDIA EIERIEQKVP AAGDIKGLES CRLAKRVLTE PEMAIFIASK QPARYLAKRF 
AAKEAAAKAL GTGIGRGVSF QHIEISNDTN GAPLISFNGG AADRLASLGG ARAHISIADE
KHYATATVIL ES