Gene Swoo_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1246 
Symbol 
ID6115481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1584526 
End bp1585263 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content48% 
IMG OID641632729 
Productpyridoxine 5'-phosphate synthase 
Protein accessionYP_001759633 
Protein GI170725607 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0854] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00559] pyridoxine 5'-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.78837e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.31093e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCCGTA TCCTACTAGG CGTTAATATC GATCATATAG CAACATTACG TCAGGCCCGT 
GGGACATCGT ACCCAGATCC TGTCCATGCC GCCGCTGTCG CTGAGCATGC GGGCGCCGAA
GGGATCACCG TTCACCTGCG TGAAGATAGA CGCCATATCG TCGATAGAGA TATCTATTTG
CTGGCTAAAA CTTTAAAAAC CCGCATGAAT TTTGAGATGG CTGTCACCGA CGAGATGCTA
GATATCGCCT GTGAGGTTAA ACCCGCTTAT GTGTGTTTAG TACCGGAAAA GCGTGAAGAG
TTAACCACTG AAGGGGGCTT AGATGTTGCC GGTCAGATGG GAAAAATTGA ATCGGCGGTG
CAGCGTCTTA CTGATATCGG TGTGAAGGTT TCACTGTTTA TCGATGCAGA TAAAACCCAA
ATAGATGCCG CTGTCGCTGT AGGAGCACCA GTTATCGAAA TTCACACTGG CTGCTACGCT
GATGCCACTA ATGATGCGGA TCAAGCTAAA GAGCTAGCCC GTATCACAGA GATGGCAACT
TACGCACATG GCAAAGGCTT AGTGGTAAAT GCAGGTCATG GGCTTCATTA TCATAATGTT
AAGCCAATAG CCGCTATTCC TGAGCTGTAT GAGCTCAATA TTGGTCATGC GATCATTGCC
CGTGCTGCCA TCGATGGCTT AGCGACAGCG GTTAAAGATA TGAAGCAGCT AATGAATGAA
GGCCGTAGAG GCGAATAG
 
Protein sequence
MSRILLGVNI DHIATLRQAR GTSYPDPVHA AAVAEHAGAE GITVHLREDR RHIVDRDIYL 
LAKTLKTRMN FEMAVTDEML DIACEVKPAY VCLVPEKREE LTTEGGLDVA GQMGKIESAV
QRLTDIGVKV SLFIDADKTQ IDAAVAVGAP VIEIHTGCYA DATNDADQAK ELARITEMAT
YAHGKGLVVN AGHGLHYHNV KPIAAIPELY ELNIGHAIIA RAAIDGLATA VKDMKQLMNE
GRRGE