Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1245 |
Symbol | |
ID | 6115480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1583300 |
End bp | 1583986 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641632728 |
Product | DNA repair protein RecO |
Protein accession | YP_001759632 |
Protein GI | 170725606 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000428511 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000123287 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCTGCGTG GATATGTGCT TCATACTCGC CCTTTTACTG ACTCAAGTGT CTTGGTCAAT ATGCTTGTCG ATGGTCAGGG CCGCGTTGAT TGTGTGGCTC GCTTAGGCAG TGGTAAAACG TCTATTAAAA GTATACTTCA GCCATTTCAG CCGCTGATTT TTGAACTCTC TGGCCGTAGC AACTTAAAGA ATCTGATCCG AGTCGAGTCT GCTAGCCCGG CGGTGCCTAT CAGTGGTGAG GTGAGTTTTG CGGGGTTTTA TCTTAATGAG CTAATGGTGC GCTGTATCAG TGTTGACCAT GGCGCTGAGG AGATCTTTTT CGTTTACCAC AAAACCTTAA TGGCAATGGC TGCTGGTTTT TGTCAGAGCC AGCTTCGCTA TTTTGAGTTG AGTCTGCTTA AAGAGATAGG TTTGATGCCA ACACTCAATG TGGATATCGC CCAAGATGCG ATAGAGGCGG ATTACTACTA CAGATTGCTG CCCGATGAGG GATTTGTTAA CGCCTTAGGG CCAAAAACAT CACACTACAG CGGTGAGATG TTGCTGTCGC TAGAGAGCCA CACACTGCAA GCTGAGCATT TTAAGCAGGC AAAGCATCTG ATGCGCCTGC TATTGGCTCC CTGCTTAGGC GATAAGCCCC TTAAGTCTCG CGCGCTGTTT AAAACTAAAT CTCAATATGC AAAATAA
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Protein sequence | MLRGYVLHTR PFTDSSVLVN MLVDGQGRVD CVARLGSGKT SIKSILQPFQ PLIFELSGRS NLKNLIRVES ASPAVPISGE VSFAGFYLNE LMVRCISVDH GAEEIFFVYH KTLMAMAAGF CQSQLRYFEL SLLKEIGLMP TLNVDIAQDA IEADYYYRLL PDEGFVNALG PKTSHYSGEM LLSLESHTLQ AEHFKQAKHL MRLLLAPCLG DKPLKSRALF KTKSQYAK
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