Gene Swoo_1244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1244 
Symbolera 
ID6115479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1582199 
End bp1583188 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content46% 
IMG OID641632727 
ProductGTP-binding protein Era 
Protein accessionYP_001759631 
Protein GI170725605 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00436] GTP-binding protein Era
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.78109e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.43866e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCAAGA AAGATAGCAA CAGTAAGAGT GAGCCGAGTT TAGACGATCT GTTAGCGCAG 
ATGAATAACC CGTCATCGGC GGCTAAATAT GATGTAACTT ACTGTGGCAT GGTAGCTATC
GTTGGGCGTC CTAACGTAGG TAAATCGACA CTACTGAACA ATCTGCTTGG GCAGAAGATC
AGTATCACCT CTAAGAAGCC GCAGACAACG CGTCACCGCA TCATGGGAAT CCATACCGAT
GCTGAGCGTC AAGTGGTGTT TATCGACACA CCAGGTCTTC ACATTGAAGA GAAACGTGCC
ATTAACCGTT TGATGAACCG TGCTGCAGCC AGTTCGTTAG CGGAGGTCAG CTTAGTTATC
TTTGTTGTCG ATGGCATGAC CTGGACCGAT GATGATGAGA TGGTGTTGCG TAAGCTACAG
AGCCGTGACG ATGGTCGTAA AACGGTTTTG GCAGTCAACA AGGTTGATAA TATCAAGGAT
AAGGAGGAGC TATTTCCCTA CCTTGAAGAG TTATCGAAGA AGTTTCCTTT CGATGAAATT
TTGCCTATCT CTGCCACTAA AGGCACCAAT GTGCAACGTA TCTTAGATAT GTCGGTAGAA
TCTGTGCCAG AATCTCCACA CTTCTTCCCT GAAGATTATG TGACCGATCG CTCGCAGAAG
TTTATGGCAT CTGAGATCGT ACGTGAAAAA CTGATGCGCT TCTTAGGTGA TGAGCTTCCC
TATGATTGCA CGGTAGAGAT TGAACAGTTT AAGATGATGG AAAATGGTGT CTATCAGATC
AATGCCTTAG TGCTAGTTGA GCGAGAGACC CAAAAGCGTA TGGTTATCGG TAACAAGGGT
GAGCGCATTA AGAAGATCAG CTCCGCAGCG CGTATGGATA TGGAGGTTTT ATTTGATAAT
AAAGTCTTCC TTGAGATGTG GGTGAAGGTG AAGTCTGGTT GGGCTGATGA TGAGCGCGCA
CTGCGTAGCT TAGGCTATGG CGACGAGTAA
 
Protein sequence
MSKKDSNSKS EPSLDDLLAQ MNNPSSAAKY DVTYCGMVAI VGRPNVGKST LLNNLLGQKI 
SITSKKPQTT RHRIMGIHTD AERQVVFIDT PGLHIEEKRA INRLMNRAAA SSLAEVSLVI
FVVDGMTWTD DDEMVLRKLQ SRDDGRKTVL AVNKVDNIKD KEELFPYLEE LSKKFPFDEI
LPISATKGTN VQRILDMSVE SVPESPHFFP EDYVTDRSQK FMASEIVREK LMRFLGDELP
YDCTVEIEQF KMMENGVYQI NALVLVERET QKRMVIGNKG ERIKKISSAA RMDMEVLFDN
KVFLEMWVKV KSGWADDERA LRSLGYGDE