| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1243 |
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| Symbol | rnc |
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| ID | 6115478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1581525 |
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| End bp | 1582202 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632726 |
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| Product | ribonuclease III |
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| Protein accession | YP_001759630 |
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| Protein GI | 170725604 |
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| COG category | [K] Transcription |
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| COG ID | [COG0571] dsRNA-specific ribonuclease |
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| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000271922 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000131093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGAACCGA TTAAGAACAT ACCTAGACTG TGTAGAACCT TAGGTTATGA CTTTAGTGAA
TTAGCACTGC TTGATCATGC GCTGACACAC CGCAGCGCGG CGAGTAAACA CAATGAAAGG
TTAGAGTTCC TTGGGGATTC TATACTCTCT ATTATTATCT CTGATGCGCT TTATCATCAG
TTTCCTAAAG CGACAGAGGG AGATCTTAGC CGTATGCGAG CCACATTAGT GTGTGGCAAA
ATGCTGGCTG AGATCGGCTT TGAATTTAAG TTAGGCGACT ACTTAAAGCT TGGCCCTGGT
GAGTTGAAAA GCGGCGGCTT CCGCCGTGAG TCAATTATTG CCGACGCCGT AGAGGCGATA
ATTGGTGCAG TCTACTTAGA TTCCGATCTG GAAGTGACTC GCAGCTTAGT GCTTGGCTGG
TACAAGACAC GTCTTGAAAC CATTCAACCT ATAAATCAAA AAGATCCGAA AACCTTGTTG
CAAGAGTTGT TGCAGGGTTA TAAAAAACCG CTCCCTGTCT ATAAAGTGAC AGATATTAGA
GGGGAAGCGC ACGCGCAAAC CTTTACAATA GAGTGTTATG TTGAAGAGTT GCGTAAACCC
GTTGTTGGGG TTGCGAGTTC CCGAAGAAAA GCCGAGCAGC TTGCCGCTGC ACAGGCTTTG
GAGTTAATAA AACGATGA
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| Protein sequence | MEPIKNIPRL CRTLGYDFSE LALLDHALTH RSAASKHNER LEFLGDSILS IIISDALYHQ
FPKATEGDLS RMRATLVCGK MLAEIGFEFK LGDYLKLGPG ELKSGGFRRE SIIADAVEAI
IGAVYLDSDL EVTRSLVLGW YKTRLETIQP INQKDPKTLL QELLQGYKKP LPVYKVTDIR
GEAHAQTFTI ECYVEELRKP VVGVASSRRK AEQLAAAQAL ELIKR
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