Gene Swoo_1241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1241 
Symbol 
ID6115476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1578653 
End bp1580443 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content46% 
IMG OID641632724 
ProductGTP-binding protein LepA 
Protein accessionYP_001759628 
Protein GI170725602 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0481] Membrane GTPase LepA 
TIGRFAM ID[TIGR01393] GTP-binding protein LepA
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.01097e-06 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.17727e-07 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCACA TTAGAAACTT TTCGATTATT GCCCATATCG ATCACGGCAA ATCAACACTT 
TCAGACCGAT TGATTCAAGA ATGTGGCGGT CTTTCTGATC GTGAAATGGC AGCCCAAGTT
CTAGATTCAA TGGACATTGA GCGTGAGCGT GGTATCACCA TTAAAGCCCA GAGCGTCACC
TTAGATTATA AAGCGTTAGA TGGCGAAACT TACCAGCTAA ACTTTATTGA TACCCCAGGT
CACGTCGATT TCTCCTATGA AGTTTCTCGC TCTTTGGCTG CTTGTGAAGG TGCGCTGCTC
GTTGTTGATG CAGGCCAAGG TGTTGAAGCA CAAACACTTG CCAACTGTTA CACCGCCCTT
GAGATGGATA TGGACGTAGT GCCTGTTCTG AACAAGATTG ACCTACCACA GGCCGATCCA
GAGCGTGTAG CGGATGAGAT TGAAGATATC GTGGGTATCG AAGCGGCCGA TGCCGTTCGT
TGCTCGGCTA AAACCGGTAT TGGTATTAAA GATGTACTTG AAGTCATTGT CGCGCAGATC
CCACCGCCAG AAGGTGATAC AGAGGGACCG CTTCAGGCTT TGATTATCGA TTCTTGGTTC
GACAGCTATC TAGGCGTCGT ATCATTGGTT CGAATTAAAA ATGGCATATT GAAGAAAGGC
GATAAGTTTA AGGTGATGTC CACAGGACAA ACCTATAACG CCGATCGAGT AGGTATCTTT
ACGCCAAAGC AAACCGACAC AGCAGAGCTG AAAACCGGTG AAGTAGGGTT TGTTATTGCG
GGTATTAAAG AGATCCACGG TGCACCAGTT GGTGATACCT TAACCCATGC TAAACATGGT
GCTGAAAAGC CACTGGGTGG ATTTAAAAAG GTGAAGCCTC AGGTTTATGC TGGTGTATTC
CCTATCTCTA CCGATGATTA TGAAAGTTTC CGTGATGCCT TGAACAAACT AAGTTTGAAT
GATGCATCAC TGTTTTTCGA GCCAGAGACC TCATCGGCCC TTGGTTTTGG TTTCCGCATC
GGCTTCTTAG GTCTGCTGCA CATGGAGATC ATTCAGGAGC GTCTTGAGCG TGAATATAAT
CTCGACTTAA TCACCACTGC GCCAACAGTA GTGTATGAGA TTGTTAAGAC CAGTGGTGAT
ACCATCTATG TTGATAACCC ATCGGATCTG CCAGCAATTA ATAATATTGC TGAGATGCGT
GAGCCGATTG TTGAGACCAA TATTCTGGTA CCAAAAGATT ACCTAGGTAA CGTTATAACC
TTGTGTGTCG AGAAACGTGG CGTACAGAAA AACATGGTGT ATCACGGGAA CCAAGTAGCG
ATCACTTATG AGTTGCCAAT GGCGGAAGTG GTCATGGACT TCTTCGATCG CCTTAAGTCA
ACCAGTCGCG GTTATGCTTC ACTTGAGTAC AACTTTGTTC GGTTTGAGCC TGCCGATATG
GTGCGCTTAG ATATCTTGAT CAATGGCGAC AGAGTCGATG CGTTAGCGAT GATTATCCAC
AAAGGTCTGA TCCGTACTAA GGGTCTAGCA CTCGTGAATA AGATGAAAGA GCTTATTCCG
CGTCAGATGT TTGATATTGC GGTTCAGGCA GCTGTTGGCA GTCAGATCAT CGCACGTTCA
TCCATCAAGG CGATGCGTAA AGATGTAACG GCTAAGTGTT ACGGTGGTGA CGTTTCCCGT
AAGAAGAAAC TGCTTAATAA GCAGAAAGAG GGTAAGAAAC GCATGAAGTC TGTGGGTAAC
GTTGAAGTAC CACAGGAAGC CTTCCTTGCC GTTCTTAAGC TCAACGATTA A
 
Protein sequence
MKHIRNFSII AHIDHGKSTL SDRLIQECGG LSDREMAAQV LDSMDIERER GITIKAQSVT 
LDYKALDGET YQLNFIDTPG HVDFSYEVSR SLAACEGALL VVDAGQGVEA QTLANCYTAL
EMDMDVVPVL NKIDLPQADP ERVADEIEDI VGIEAADAVR CSAKTGIGIK DVLEVIVAQI
PPPEGDTEGP LQALIIDSWF DSYLGVVSLV RIKNGILKKG DKFKVMSTGQ TYNADRVGIF
TPKQTDTAEL KTGEVGFVIA GIKEIHGAPV GDTLTHAKHG AEKPLGGFKK VKPQVYAGVF
PISTDDYESF RDALNKLSLN DASLFFEPET SSALGFGFRI GFLGLLHMEI IQERLEREYN
LDLITTAPTV VYEIVKTSGD TIYVDNPSDL PAINNIAEMR EPIVETNILV PKDYLGNVIT
LCVEKRGVQK NMVYHGNQVA ITYELPMAEV VMDFFDRLKS TSRGYASLEY NFVRFEPADM
VRLDILINGD RVDALAMIIH KGLIRTKGLA LVNKMKELIP RQMFDIAVQA AVGSQIIARS
SIKAMRKDVT AKCYGGDVSR KKKLLNKQKE GKKRMKSVGN VEVPQEAFLA VLKLND