Gene Swoo_1203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1203 
Symbol 
ID6115438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1535801 
End bp1536169 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content45% 
IMG OID641632687 
Productiron-sulfur cluster insertion protein ErpA 
Protein accessionYP_001759591 
Protein GI170725565 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.592429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000206592 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTGAAG AGATAGCTGA ACAAGCGACA GAACAAGATG AGTTGCCAAT CCAGTTTACG 
GATGCAGCAG CATCAAAGGT GAAAACCCTG CTCGAAGAAG AGGAAAATGA TGCGCTGAAA
CTGCGAGTAT ATGTTACCGG TGGTGGCTGT TCTGGTTTTC AGTATGGTTT CACTTTTGAC
GAGAAAGTAA ATGAAGGTGA CTTTACTGTT GAAAAGCAGG GCGTACAGCT TGTTGTCGAT
CCTATGAGCC TACAGTATTT AGTGGGTGGC GAGGTTGATT ATACTTCAGG CCTAGAAGGT
TCTCGTTTCT TCGTGAAAAA TCCTAACGCA ACGACGACCT GTGGTTGTGG TGCGAGCTTC
TCTGTGTAA
 
Protein sequence
MSEEIAEQAT EQDELPIQFT DAAASKVKTL LEEEENDALK LRVYVTGGGC SGFQYGFTFD 
EKVNEGDFTV EKQGVQLVVD PMSLQYLVGG EVDYTSGLEG SRFFVKNPNA TTTCGCGASF
SV