| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1190 |
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| Symbol | |
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| ID | 6115425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1521993 |
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| End bp | 1522808 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641632674 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001759578 |
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| Protein GI | 170725552 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000541539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATTATC AAACTTTTCA GCCTCATCCA GATTTAGAAT CGCTAATTAG CTGTTATTGG
ACTTTGGAAG TTCCTTCAAC AGGGGATACT CAAAGACAGA CTATAGTTCC TGACGGTACA
ATCGAAATGG CGTTTATATT GGGGGACGAT ATAAAACGAT ATACCTCGGA GAGTCATTTC
ATTATACAAC CTAGGGCTAT GGTATTAGGG CAAAACACGA CCTCTTTTAA CATTGAGCCG
ACAGGGTATG TCGATACATT TGCAGTCCGT TTTTATCCTT ATGGCTTTGC CAATTTTGTA
AATGTACCTA TTAAAACATT GGCAAACAAA GAAACACCAA TAGAGATGTT GTTTGAAAAA
ACAGTAGCCC AAGATTTAGA ACAAGAGATT ATTCAAGCAT CTGACACAAA ACAAAGAATA
GAGATAATCG AATTATTTCT TTTGAAGAAA CTAACTGAAC ATACGATGGC TGACAGGATT
GTTAGAACAA CAATAGATAC TTTGCTCACA ACAAAAGGAG GGACATCGAT TAGTGAGATT
TTTAAAGACG ATCCATCCAA AAGAAGACAA CTTGAGAGAA TGTTTGTAAA CAAAGTGGGT
GTTAGTCCGA AACAGTTAGG TAAATTGATT CGATTACAAA GCGCTTTAAA AATGTTACTT
AACGAAGAAG GAGGAACTCT TACCAATATT GCATATGAAA ATGATTACTA CGACCAATCT
CATTTTACTA AAGATTTCAA AGATTTTACT GGAGTCAGTC CAAAAGAGTT TTTAGGGAAT
GAAAATATGG CCCTTTCTTC CATTTTCTAC AAATGA
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| Protein sequence | MNYQTFQPHP DLESLISCYW TLEVPSTGDT QRQTIVPDGT IEMAFILGDD IKRYTSESHF
IIQPRAMVLG QNTTSFNIEP TGYVDTFAVR FYPYGFANFV NVPIKTLANK ETPIEMLFEK
TVAQDLEQEI IQASDTKQRI EIIELFLLKK LTEHTMADRI VRTTIDTLLT TKGGTSISEI
FKDDPSKRRQ LERMFVNKVG VSPKQLGKLI RLQSALKMLL NEEGGTLTNI AYENDYYDQS
HFTKDFKDFT GVSPKEFLGN ENMALSSIFY K
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