Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1187 |
Symbol | |
ID | 6115422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1519574 |
End bp | 1520242 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641632671 |
Product | hypothetical protein |
Protein accession | YP_001759575 |
Protein GI | 170725549 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000506322 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTTGATAT TTCATATTAC TGCAGGAGCG ATTGCGCTTC TCTGCGGAAT AACAGCCTTA ATTAGCCGTA AAGGCACTAA AGTACACAGA ACTGCTGGTA ATGGCTTTTT CTTCGCCATG ATGACCGTCG CCGCAACTGC TATCTATCTT GATGCGGTGA AGATGGAGTT ACCTGTAATG GGGATTTTGA CTGGCTATAT GGCCTCCACC TCTTGGATGG CAATCAAGAG ACCTGAAGGT AGCCTAGGCC TGTTCGACAA ACTCGCCTTC GCGACGATCA CAACCCTAGC CGCCACTCTA TTTATCTTAG GCTCACTTGG GGTCTCACCG GGAACAAACA TCCCCTCCGC CTTCTTCTAT ATTTTCGGTT CTGTCGCCGC GTTTGCCGCA ACCTTAGATC TTATCATGCT GCTCAAGGGT GGGGTCTATG GAAAACACAG AGTCGCACGT CATCTATGGC GTATGTGTAT CGCCATGATC ATGGCCACTA TGTCATTTCT AGCTCAAAAA GCTGCTATTC CAGAGGTGTT ACATGGATCT TCTCTGTTAT GGATGCCAGT ACTTTTACTG TTCATTTTTA TGTTCTATTG GCTAATTAAG ATGATATTTA GCAAGAGATA TCAAGTAAGA GTAAATAGAG CCGAGGTCGA ACAGCATCAA GGAAAATAG
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Protein sequence | MLIFHITAGA IALLCGITAL ISRKGTKVHR TAGNGFFFAM MTVAATAIYL DAVKMELPVM GILTGYMAST SWMAIKRPEG SLGLFDKLAF ATITTLAATL FILGSLGVSP GTNIPSAFFY IFGSVAAFAA TLDLIMLLKG GVYGKHRVAR HLWRMCIAMI MATMSFLAQK AAIPEVLHGS SLLWMPVLLL FIFMFYWLIK MIFSKRYQVR VNRAEVEQHQ GK
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