Gene Swoo_1185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1185 
Symbol 
ID6115420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1517483 
End bp1517971 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content46% 
IMG OID641632669 
Producthypothetical protein 
Protein accessionYP_001759573 
Protein GI170725547 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000464708 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAAAACC TATCTAGAGG CAGTGGAGTA CTGTTGATAA AAGTGCTATC GATATTTGCG 
CTGCTTTACA CTACAACATC CCAAGCAGAC CAAGCCCCAT TAATAGAGAC AATGCGTCCT
CTTGATACGG CAGTATTTGA GGCTTTTAAT CACTGTAAAG ACCCGAAAGA GTTAGCCAAA
CACGCCAGTT ACTTCGATGA GGCAGTCGAG TTCTATCACG ACAATGGTGG CGTAACTTGG
ACCCGTGAGG CCATGATTGG CAATACTCAA AAAAATGCCT GTGGGAACTA TACCCGCAAG
CTTGTTGCTG AATCCTTTAA CGCCTATCCC ATTAATGACT TTGGCGCGAT AACCGAAGGA
GTGCACTACT TTTGCAAGCC TGCAACCAAG GAGTGTCATG GCCAAGCCAA ATTCGTTATG
GTTTGGCACA ACAAGAACGG CGAATGGAAA GTCACCCGCG TGTTGAGTTA TGGCCATATT
GCCAATTAA
 
Protein sequence
MKNLSRGSGV LLIKVLSIFA LLYTTTSQAD QAPLIETMRP LDTAVFEAFN HCKDPKELAK 
HASYFDEAVE FYHDNGGVTW TREAMIGNTQ KNACGNYTRK LVAESFNAYP INDFGAITEG
VHYFCKPATK ECHGQAKFVM VWHNKNGEWK VTRVLSYGHI AN