| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1172 |
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| Symbol | |
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| ID | 6115407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1505548 |
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| End bp | 1506567 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632656 |
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| Product | aspartate carbamoyltransferase |
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| Protein accession | YP_001759560 |
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| Protein GI | 170725534 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.868394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000909543 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTCAGT TTCAAGGTTC TCATATCCTA TCGGTAAACC AGCTCGATCT GGACGCCGTT
CAACAGATAT TCAATGTTGC TTCCCGCATG ACACCCTATG CCCTTAGACA GAAGCGTACT
ACTGTCTTAG ATGGTGCCAT CTTAGGCAAT CTGTTTTTCG AACCAAGTAC ACGTACCCGT
ATCAGCTTCG GTTGTGCATT TAACCTGCTC GGCGGCAAAG TCAACGAAAC CGTTGGTATG
GCATCATCGT CACTCTCAAA AGGTGAGTCC CTATACGATA CAGCCCGAGT GCTCTCAAGC
TACTCAGATG TGATTGCGAT GCGCCACCCA GAAGCTTTCT CGGTGAAAGA GTTTGCCCAA
GGCAGCCGTG TGCCAGTGAT TAATGGTGGC GATGGCTCCA ACGAGCATCC AACCCAAGCC
CTACTTGATC TGTTTACCAT ACAGAAAGAG CTCGCAACCC AAGGGCAAGA TATTAGCGGT
ATGAATATCG CGATGGTGGG GGATCTTAAA TTTGGTCGTA CTGTGCACTC TCTCTCTCGT
CTGCTGTGCA TGTATAAAGA TGTGACCTTC ACATTGGTTT CACCAAAAGA ATTGGCGATG
CCTGACTATG TATTAAATGA CATAGAAAAT GCTGGGCATA AGATCACAAT TACCGATCAA
CTTGAGGGTA ATCTGGATCA GGCTGATATA CTCTACCTCA CACGCATTCA AGAGGAGCGT
TTTCCTTCAC AGGAAGAGGC CAATAAATAC CGTGGTAAGT TCCGACTTAA CCACACTATT
TATACGAAAC ACTGCAAATC AAATACAGTG ATCATGCACC CGCTGCCTAG AGACTCTCGT
GAGCAAGCCA ATGAACTGGA TAATGACCTT AACAGTCACC CTAATCTGGC TATCTTTAGA
CAAGCTGATA ACGGCCTGCT GATCCGTATG GCACTATTTG CACTGACACT CGGTGTTGAC
ACACAACTAG AAAAACATGA GTGTCCGGTT AACTGGTATT CACGTAAAGC CGAACTATAA
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| Protein sequence | MTQFQGSHIL SVNQLDLDAV QQIFNVASRM TPYALRQKRT TVLDGAILGN LFFEPSTRTR
ISFGCAFNLL GGKVNETVGM ASSSLSKGES LYDTARVLSS YSDVIAMRHP EAFSVKEFAQ
GSRVPVINGG DGSNEHPTQA LLDLFTIQKE LATQGQDISG MNIAMVGDLK FGRTVHSLSR
LLCMYKDVTF TLVSPKELAM PDYVLNDIEN AGHKITITDQ LEGNLDQADI LYLTRIQEER
FPSQEEANKY RGKFRLNHTI YTKHCKSNTV IMHPLPRDSR EQANELDNDL NSHPNLAIFR
QADNGLLIRM ALFALTLGVD TQLEKHECPV NWYSRKAEL
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