Gene Swoo_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1164 
Symbol 
ID6115399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1496871 
End bp1497398 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content44% 
IMG OID641632648 
Producthypothetical protein 
Protein accessionYP_001759552 
Protein GI170725526 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.40934e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00261223 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGAGG TTACCCAGCA AGGTGTGGAT GCTTTTCTTG AGTTTGTCGA TAGCAACGAC 
AGAGAGCTTA TCCCCTATCT ACTCCATGAG TTCAGTGATT TTATCTCAGA AAAACCCGTA
AAAGCCTATC GCGGCGTTCG TTACCCTAAG TCAATTTCTA CTGACTCCAC TATTTTTGAG
CCAAAGCCAG TCTCTTTAGT ATCTCTGAGC ATGAGCCGCT CTCAAGCGAT GATATTTGCC
GATAACTCGA CCTCAATAGG GCGAAGACCA GTAAAGTTCA GTGGTGATAT TGGCGTACTC
TATCAAGCCA AAATTCAAGG AGCTTATTTG AATCTGCATA AGCTTGCGAC TTATTTAGTC
AATTTAGCTT GCAGTGGGCT GAAGCCAGAG GGAGTTTGCT TTGATCCCAT GGACAAGCGT
CTTCAATTGG CACTGACTGA GCAGGAGTTA ATTGGCTCGG CGATATTAAT ACCGATCACC
CAATATGATG GTCACAACTT AGCGTTAGGC TTTCAACAGG CGGCATAA
 
Protein sequence
MKEVTQQGVD AFLEFVDSND RELIPYLLHE FSDFISEKPV KAYRGVRYPK SISTDSTIFE 
PKPVSLVSLS MSRSQAMIFA DNSTSIGRRP VKFSGDIGVL YQAKIQGAYL NLHKLATYLV
NLACSGLKPE GVCFDPMDKR LQLALTEQEL IGSAILIPIT QYDGHNLALG FQQAA