Gene Swoo_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1163 
Symbol 
ID6115398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1495827 
End bp1496732 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content45% 
IMG OID641632647 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001759551 
Protein GI170725525 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000106835 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0179239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGAG TTTTCTTGTG GTTCATTATA AGCTTAATCC CCTCTGTTGC GTTGGCAAAT 
GTGTACACAT TGCCGGAAAA TGGTAGTCGC CTTATTGGCG AGATCCAGAT GCATACTGTT
GTTAAGGGTG ACTTCTTTCA AACGATAGCT AAACAGTACA ACATAGGCAT TTTGGAGTTA
ATGGAAACCA ACCCTGGTGT GGATCCATTT CTGCCTGATG TAGGCACTAA GCTTGTTATC
CCAACTCAGA TGCTGTTGCC AGATGTTCCA CGTACTGGGA TTGTGATTAA CCTGCCTGAA
CTACGCCTCT ACTACTTTCC TAAAAATGGT AAAGAGGTTC ATGTTTTCCC TGTTGGAATA
GGGCGTATTG GTCGCGAAAC CCCTGAGATG GTCACTAAGA TTAAATCTAG GATCCCTAAT
CCAAGCTGGA CGCCACCTGC AAGTATTCGT AAAGATCATC TAGAGGAGCG TGGTGAAGTG
CTTCCACGTA TTGTGCCTGC AGGGCCAGAC AATCCGCTGG GGAAATATGC AATGCAGCTC
TCCTACGGCG ATGGCAGCTA CCTTATTCAC GGTACCAATA AAGATTTTGG GATCGGCATG
CGTGTTAGCT CTGGTTGTAT CCGTCTAAAC CCAGATGATA TTGAGTGGTT ATTCCATCAG
GCTAAATATG GCGACTCAGT TAGAATTATC AACCAGACAG TGAAAACCTC TTCTGAGCCT
GATGGAGAGC AGATCATTGA GGTGCACTCT GCGCTGTCAA AGTCAGAGTT AGATGCCAGT
AGAGAGAAGG TCGTAAGTTT GACCGCTGGG ATTGTTAAGT TTATCAGTCA AGAGAGTGTA
GATAGCTTTA AAGCCAATGA TGCTCTGCTG GCTCAAGATG GATTACCGAT TAATATCAGC
TTGTAA
 
Protein sequence
MMRVFLWFII SLIPSVALAN VYTLPENGSR LIGEIQMHTV VKGDFFQTIA KQYNIGILEL 
METNPGVDPF LPDVGTKLVI PTQMLLPDVP RTGIVINLPE LRLYYFPKNG KEVHVFPVGI
GRIGRETPEM VTKIKSRIPN PSWTPPASIR KDHLEERGEV LPRIVPAGPD NPLGKYAMQL
SYGDGSYLIH GTNKDFGIGM RVSSGCIRLN PDDIEWLFHQ AKYGDSVRII NQTVKTSSEP
DGEQIIEVHS ALSKSELDAS REKVVSLTAG IVKFISQESV DSFKANDALL AQDGLPINIS
L