| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1161 |
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| Symbol | |
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| ID | 6115396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1494039 |
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| End bp | 1494839 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632645 |
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| Product | undecaprenyl pyrophosphate phosphatase |
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| Protein accession | YP_001759549 |
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| Protein GI | 170725523 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
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| TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000507346 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0186967 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATACGT TTCAGGTCAT CATTTTAGCG CTTATTCAAG GCTTGACCGA GTTTTTGCCC
ATTTCGAGTT CGGCGCACCT TATTTTGCCT TCGCAGATTT TAGGCTGGGA AGATCAAGGT
TTAGCCTTCG ATGTTGCTGT ACATATTGGC TCTTTGTTGG CGGTGGTGCT CTATTTTCGT
AAAGAGGTGG TCTCACTGCT GACCTCTTGG CTAGCCAGTA TTTTTAAAGG ACAGAAGAGT
GATGACAGTA AACTTGCTTG GTGGATTATC TTAGCCACTC TCCCCGCTGT TATCTTAGGT
TTTGCCCTCA AAGATATGAT AGAGGTCTAT CTGCGAGGCC CTGGGGTTAT CGCCATCACG
ACGGTTTTGT TTGGTCTGCT ACTTTGGTGG GCTGATAGAA TGTCCCGTTG TGAATTGACT
GAATATCAGA CTGGCTGGAA GAAAGCCCTT TTAATCGGTT TTGCTCAAGC GTTGGCACTC
ATACCCGGTA CTTCACGCTC TGGCGCAACC ATTACAGCCG CGCTTATGTT AGGGCTAAAT
CGTGAAGCGG CAGCTCGTTT CTCCTTTCTT ATGTCGATAC CGGTTATTTT AGGTGCGGCT
ATTTTGATGA GTAAAGATCT GTTTGAGAGC GGCCATGTCA TCGATTACTC CTCATTGGCA
TTGGGTGTAG GTGTGTCATT TGTGGCTGCA TATACCTGTA TTCATCTATT TTTAAAAATC
ATTAGCCGTA TGGGGATGAC ACCATTTGTT ATCTACCGTT TGGCGCTTGG GGCGCTCCTA
TGTGCCTTTA TATTTATGTA A
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| Protein sequence | MDTFQVIILA LIQGLTEFLP ISSSAHLILP SQILGWEDQG LAFDVAVHIG SLLAVVLYFR
KEVVSLLTSW LASIFKGQKS DDSKLAWWII LATLPAVILG FALKDMIEVY LRGPGVIAIT
TVLFGLLLWW ADRMSRCELT EYQTGWKKAL LIGFAQALAL IPGTSRSGAT ITAALMLGLN
REAAARFSFL MSIPVILGAA ILMSKDLFES GHVIDYSSLA LGVGVSFVAA YTCIHLFLKI
ISRMGMTPFV IYRLALGALL CAFIFM
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