| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1147 |
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| Symbol | |
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| ID | 6115381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1475821 |
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| End bp | 1477161 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632630 |
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| Product | beta-galactosidase |
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| Protein accession | YP_001759535 |
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| Protein GI | 170725509 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
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| TIGRFAM ID | [TIGR03356] beta-galactosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.94123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAT CTTTACCAGA AGCGTCGAGG CTTAACCAAA AAGAGTTTAC TTACGGCGTT
GCCACCGCTT CGTTTCAAAT TGAGGGGGGC TATGACTCCC GACTCCCCTG CATTTGGGAT
ACCTTCTGTT CAACCCAAGG GAAGATCCGT GATGGTTCTG ATGGCAAATC AGCCTGTGAG
CACCTGAAAC TATGGAAAGA AGATATTGAA CTGATTGATT CACTGAACGT AGATGCTTAC
CGACTTTCAC TCTCTTGGGG CAGGGTGATC AATCAAGATG GCAGCGTTAA TTCTGAAGGA
ATAGATTTTT ATATTCAGCT ACTTGATGCC CTCAAACGCA AGAAGATTAA AGCCTTTGTC
ACTCTCTATC ATTGGGATCT ACCACAACAT ATTGAAGACA ATGGCGGCTG GCTCAACCGC
GAAACCGCCT TCCTGTTTCA AGACTATGCT GATAAAGTCA GCCAAATCCT CGGCGATAGA
GTCTACTCTT ACGCGACACT CAATGAGCCG TTTTGCAGCT CATACTTAGG TTACGAGGCA
GGTATTCATG CTCCGGGGTT GGCACAGGTA TCCTATGGCA GACAAGCAGC ACATCATCTA
CTGCTCGCCC ATGGACTCGC GATGCAGGTG CTGCAAAAAA ACGCCCCACA TAGCCTCAAT
GGTATCGTAC TGAACTTTAC CCCTTGCTAT CCGGTCAGCG ATTCTCTGCA AGATAAGAAA
GCAGCAGCCC TTGCCGATGA ATACTTTAAC CAATGGTATA TCAAGCCACT TTTCGATGGC
CGTTACCCAG ATATTATGGG CAGCTTAGAG GATAAGGATA AACCCGTTAT TTTGGCGGGA
GATATGGATA TTCTGACTCA ACCTCTCGAT TTCTTGGGCG TTAATTTTTA TACCCGAAAT
CGATATCAAC ACTGTCCAGA GCAAAGATTT AAAGAGATAA CCATGCCTGA TGTTCCTAGA
ACAGATATTG GCTGGGAGAT CTACCCTCAA GCTTTTACGG ACCTACTTAT CTCTCTGGAT
AAATCCTATC AACTGCCTCC TATCTACATC ACCGAAAATG GTGCAGCGAT GGACGATAAA
CTGATAGCGC AATCGGTCAA TGATCTAGAC AGAGTTCAAT ATTACCAAGG TCACCTTGAA
GCATTGGACA AAGCGATAGA AGCGGGCGTC AATATTCAGG GCTACTTCGC ATGGAGTTTA
ATGGATAACT TTGAGTGGGC TGAAGGCTAC CTAAAACGCT TCGGATTGGT ATATGTTGAC
TACAATACGC AAGTTCGCAC GATAAAAGCC AGTGGACTTG CCTATCGAGA CTTTATTACA
GCACGTCATA CCGATAACTA A
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| Protein sequence | MKISLPEASR LNQKEFTYGV ATASFQIEGG YDSRLPCIWD TFCSTQGKIR DGSDGKSACE
HLKLWKEDIE LIDSLNVDAY RLSLSWGRVI NQDGSVNSEG IDFYIQLLDA LKRKKIKAFV
TLYHWDLPQH IEDNGGWLNR ETAFLFQDYA DKVSQILGDR VYSYATLNEP FCSSYLGYEA
GIHAPGLAQV SYGRQAAHHL LLAHGLAMQV LQKNAPHSLN GIVLNFTPCY PVSDSLQDKK
AAALADEYFN QWYIKPLFDG RYPDIMGSLE DKDKPVILAG DMDILTQPLD FLGVNFYTRN
RYQHCPEQRF KEITMPDVPR TDIGWEIYPQ AFTDLLISLD KSYQLPPIYI TENGAAMDDK
LIAQSVNDLD RVQYYQGHLE ALDKAIEAGV NIQGYFAWSL MDNFEWAEGY LKRFGLVYVD
YNTQVRTIKA SGLAYRDFIT ARHTDN
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