Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1127 |
Symbol | |
ID | 6115361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1448666 |
End bp | 1449973 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641632610 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001759515 |
Protein GI | 170725489 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGTCA GCAGCCCAGT TCACAGCGAC CAATACCCCG CCTCCTACTA TTTCAGTACC GCTAAGGAGC TCCATGAGCA CCCTCAGCTG CAGGAGCAGA TAAGCGCCGA TGTATGCATT GTTGGCGGTG GCTTTAGTGG AATAAACACT GCCATCGAAC TGGCTCAAAA AGGGTTCTCA GTAGTGCTTC TGGAAGCTAA GCGCATTGGC TGGGGCGCTT CGGGAAGAAA TGGTGGTGAG CTTATTCGTG GTATTGGCCA CAACGTCGCT CAATTTAAAA ACATCATCGG CAGCGAAGGC GTCGAAGCCA TCAATCAGAT GGGCTATGAA GCAGTCAACA TCGTCAGGCA GCGTGTTGCA GAGCATAATA TCGACTGTAA CCTGCAGATG GGTTACTGCG ACTTGGCTAT AAAAACCCGT CATATGGCAG AACTTCAAGA GGATTACGAT GACCTTCTGT CTCAAGGGCG AGGCGAAGGT TTTACCCTGT TACAGAAACA GGATATCAAA CAGGTTATCG GTTCAGACTG CTATGAAGGC GCCCTTGTGG ACATGAATAG CGGCCATCTT CATCCACTCA ACCTCGCGCT AGGTGAAGCC AAAGTGGCGA AGGCTTTGGG CGTTAAGATG TTTGAGTACA GCGCAGCAGA GAAGATCATC AAGGGAGATA AGCCCCAAGT CATCACAGCT AAAGGTCAGG TCAACTGCCA ATATCTGGTG CTGGCTGGTA ACGCCTATAT TGGCCATAAA CTCGACAGTT ACCTAGGTGG GAAAGTGCTC CCGGCTGGCA GTTATTTGCT GGCCACCGAG CCACTCACCG ATGAGCAGTG CAAAGAGATT ATTCCGCAAA ACATGGCTTT TGCAGATCTG CGTATCGACT TAGATTACTT CCACCTCTCA GAAGATAACC GCCTACTCTT TGGTGGTCTT TGTACTTACT CAGGTAAAGA TCCTAAAGAT ATTGAGGCAG CTCTACGCCC AAATCTTGAG AAGGTATTCC CTCAGTTAAA GGGAGTAAGA ATCGATTTCG AATGGGGCGG CATGATAGGC ATAGGCGCCA ACCGCCTGCC ACAAATTGGA CGACTACCGG ATTGTCCCAA TATTCTCTAC GCCCAAGCCT ATGCAGGCCA TGGCGTCAAC GCCACCCATA TGGCAGCGAA ATTAATTGCC GAGGCGCTTA CCGCACAAGC TGAGCGCTTC GATATTTTTG ACAAGGTGCA GCATATGACC TTCCCCGGCG GGCCAGTGTT TCGCTCACCC ATGTTGGCAG CAGGAATGTT GTATCATCGG ATGAAGGACC TTTTTTAG
|
Protein sequence | MSVSSPVHSD QYPASYYFST AKELHEHPQL QEQISADVCI VGGGFSGINT AIELAQKGFS VVLLEAKRIG WGASGRNGGE LIRGIGHNVA QFKNIIGSEG VEAINQMGYE AVNIVRQRVA EHNIDCNLQM GYCDLAIKTR HMAELQEDYD DLLSQGRGEG FTLLQKQDIK QVIGSDCYEG ALVDMNSGHL HPLNLALGEA KVAKALGVKM FEYSAAEKII KGDKPQVITA KGQVNCQYLV LAGNAYIGHK LDSYLGGKVL PAGSYLLATE PLTDEQCKEI IPQNMAFADL RIDLDYFHLS EDNRLLFGGL CTYSGKDPKD IEAALRPNLE KVFPQLKGVR IDFEWGGMIG IGANRLPQIG RLPDCPNILY AQAYAGHGVN ATHMAAKLIA EALTAQAERF DIFDKVQHMT FPGGPVFRSP MLAAGMLYHR MKDLF
|
| |