Gene Swoo_1111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1111 
Symbol 
ID6115345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1428789 
End bp1429511 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content43% 
IMG OID641632594 
Producthypothetical protein 
Protein accessionYP_001759499 
Protein GI170725473 
COG category 
COG ID 
TIGRFAM ID[TIGR02001] conserved hypothetical protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0309164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATAAAA AATTTAATAA AAAACGGATT GCCCAAGTTA CCGGTCTTGT TCTGGCCACA 
GCGCTAATCT CACCAATCGC CTCAGCCGAA GTATCTGGCG AAGTCAGCTT AACTAACGAC
TATCGTTTCC GTGGTGTGTC ACAAACAGCA AGTAACTTTG CCATTCAAGC AGGCGTTGAT
TGGAGCCACG ACAGTGGTTT CTTCCTTGGA GCTTGGGCGA GTAATGTCGA CTTCGATGAA
CCTGATTATA ATGGACCAGA TATTGAACTT GATATCTACG CAGGTTACTA CGGCGAGCTC
AATGATGACT TAAGCTATGA TGTCACACTA TATCGTTACA ACTATCCTGG TGACAGTGAT
TTAGATTACT TAGAGGCCAG CATAGGTGTT GATTTCAGCG GTTTCCGCTT GGCTTATTGG
TACACCAATG ATTACGGTGG AAGCGATCTG GATCTGCATT ATACCGAAGT TAACTACTCC
TACGAATTCT ATGAAAACTG GAGCTTAGAT CTCCATTACG GCTACAACTT TGGTGATGGT
ATTGATGATG GTGAAGGCTT CGATAGCTAT GCTGATTACT CTATCGGTGT TTCTACTGAG
GTTGCTGGTA TTGGTTTATC ACTTGCTTGG CTAGACACTG ACATTAGTGA TGATAATCAG
GTCACAGATG ATCTGTATAA TACCGAAGGT ACTGTGCTTG CTTCTGTCAG CTACGCTTTC
TAA
 
Protein sequence
MYKKFNKKRI AQVTGLVLAT ALISPIASAE VSGEVSLTND YRFRGVSQTA SNFAIQAGVD 
WSHDSGFFLG AWASNVDFDE PDYNGPDIEL DIYAGYYGEL NDDLSYDVTL YRYNYPGDSD
LDYLEASIGV DFSGFRLAYW YTNDYGGSDL DLHYTEVNYS YEFYENWSLD LHYGYNFGDG
IDDGEGFDSY ADYSIGVSTE VAGIGLSLAW LDTDISDDNQ VTDDLYNTEG TVLASVSYAF