Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1111 |
Symbol | |
ID | 6115345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1428789 |
End bp | 1429511 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641632594 |
Product | hypothetical protein |
Protein accession | YP_001759499 |
Protein GI | 170725473 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02001] conserved hypothetical protein, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0309164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTATAAAA AATTTAATAA AAAACGGATT GCCCAAGTTA CCGGTCTTGT TCTGGCCACA GCGCTAATCT CACCAATCGC CTCAGCCGAA GTATCTGGCG AAGTCAGCTT AACTAACGAC TATCGTTTCC GTGGTGTGTC ACAAACAGCA AGTAACTTTG CCATTCAAGC AGGCGTTGAT TGGAGCCACG ACAGTGGTTT CTTCCTTGGA GCTTGGGCGA GTAATGTCGA CTTCGATGAA CCTGATTATA ATGGACCAGA TATTGAACTT GATATCTACG CAGGTTACTA CGGCGAGCTC AATGATGACT TAAGCTATGA TGTCACACTA TATCGTTACA ACTATCCTGG TGACAGTGAT TTAGATTACT TAGAGGCCAG CATAGGTGTT GATTTCAGCG GTTTCCGCTT GGCTTATTGG TACACCAATG ATTACGGTGG AAGCGATCTG GATCTGCATT ATACCGAAGT TAACTACTCC TACGAATTCT ATGAAAACTG GAGCTTAGAT CTCCATTACG GCTACAACTT TGGTGATGGT ATTGATGATG GTGAAGGCTT CGATAGCTAT GCTGATTACT CTATCGGTGT TTCTACTGAG GTTGCTGGTA TTGGTTTATC ACTTGCTTGG CTAGACACTG ACATTAGTGA TGATAATCAG GTCACAGATG ATCTGTATAA TACCGAAGGT ACTGTGCTTG CTTCTGTCAG CTACGCTTTC TAA
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Protein sequence | MYKKFNKKRI AQVTGLVLAT ALISPIASAE VSGEVSLTND YRFRGVSQTA SNFAIQAGVD WSHDSGFFLG AWASNVDFDE PDYNGPDIEL DIYAGYYGEL NDDLSYDVTL YRYNYPGDSD LDYLEASIGV DFSGFRLAYW YTNDYGGSDL DLHYTEVNYS YEFYENWSLD LHYGYNFGDG IDDGEGFDSY ADYSIGVSTE VAGIGLSLAW LDTDISDDNQ VTDDLYNTEG TVLASVSYAF
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