Gene Swoo_1105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1105 
Symbol 
ID6115339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1425636 
End bp1426067 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content44% 
IMG OID641632588 
ProductMarR family transcriptional regulator 
Protein accessionYP_001759493 
Protein GI170725467 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAC ATGAAGGTTT TACTCAGTTG GTTTTGAGCA TTTTCAGGTT AAATGGGTTA 
CTCGTCACCG AAGGAGATAA TTTGAGTCAG CCAGTAGGAC TGACAAGTGC CAGATGGAAG
ATTTTAGGAG CGGTAGAAAA GTCCCCTCAA ACCGTATCGC AAATTGCCAG AACCATGGGG
CAGACAAGGC AGAGTGTCCA ACGTATCGCC AATGAGTTGG TGAAATTAGA GATTGTCACC
TTTGAAAGTA ACCCTGAGCA TAAGACAGCC AAATTAATCG TTAGAACGGC AAAAGGCGCA
GCGCTTTTTG CATTGTTATC TGAGTCACTT ATTCCTTGGG GCCATGATGC CGTAGAGGGG
ATTTCTGAGG AGGAGCTGTT GATTACTTTA AAGGTGATCA CCAAATTAAT CGGACGCTTT
GAAGGGCGAT AA
 
Protein sequence
MTEHEGFTQL VLSIFRLNGL LVTEGDNLSQ PVGLTSARWK ILGAVEKSPQ TVSQIARTMG 
QTRQSVQRIA NELVKLEIVT FESNPEHKTA KLIVRTAKGA ALFALLSESL IPWGHDAVEG
ISEEELLITL KVITKLIGRF EGR