| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1101 |
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| Symbol | |
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| ID | 6115335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1421949 |
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| End bp | 1423646 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632584 |
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| Product | chitinase |
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| Protein accession | YP_001759489 |
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| Protein GI | 170725463 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3979] Uncharacterized protein contain chitin-binding domain type 3 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATT ACCTATCCTT AGCTATTTTA ACCACTTTGA GTCCTATAAC GCTTTTTGCC
GCAGAGCCTG TGCATTTTAC TCTGGCAGAG GTTGATGCCA AAGAGTCTGC TTTGACCGAC
TTTCCCTTGA TGAGAGCGGT GAAGTCATCT ATCGCGACCA GAGACAATGC TATTGTCGAC
GCCATTATCC CCTTGAGCCC TAACAATCCG GATAATGTTA AGCGCCTAGA GTCTGTGTTG
AGTGAAACAC AGTTTGAGTT TCTTTTTCCT GTTCGCGCTG CTGAATATAC CTATCAAGGT
TTGTTGCAAG CCGCGGCTAA GTTTCCCGCT TTATGTGGTT CATACATAGA TAATCGTGAT
GCCGATGCTA TCTGCCGTAA ATCCCTAGCT ACCATGTTTG CCCATTTTGC ACAGGAAACC
GGTGCCCATG ATAAGTGGAT GACTGAGCCA CAATGGCGAC AGGGCCTTTA TTGGGTGCGT
GAAGTGGGTT GGGATGAAAC CAAGCGCGGT GGTTACAATA TGGAGTGCAG CCCTGACACT
TGGCAAGGGC AGGTTTGGCC TTGCGGCACC TTTGCTGATG GCAGTTATAA GAGCTATTTT
GGACGCGGCG CTAAGCAGCT CTCCTACAAC TATAACTATG GGCCTTTCTC TGATGCCATG
TTTGGTGATG TCAGTACTTT GCTCAATAAC CCTGAAATGG TGGCCGATAC CTGGCTGAAC
CTAGCCAGTG CAGTGTTTTT CTTTACTTAC CCCCAACCAC CTAAACCTTC AATGTTGCAT
GTTATCGATG GAACGTGGCA GCCCAATGCA CGAGATACAC AAAATGGACT CTCAGCTGGA
TTTGGCGCAA CCACCCATAT TATTAATGGT GGCATTGAGT GTGGTTCAGG CAGTGAGAAG
CCGCAATCGC TGAATCGGAT TGAGTATTAT CAAGCACATG CGCAATATCT TGGCGTTCCA
GTGGAAGCCA GTGAGGTGCT AGGTTGCAAG GATATGAAGC CTTTTGATAA CCAAGGGGCA
GGTGCCATGT TGATCTATTG GGAGCAAGAT TGGTCATATA TTGCAGGAAA TCCCAATGGT
GGCAAAAGCT ATGCCTGTAA GTTGGTGGGG TATCAGACTC GTTATAGTGC TTTTAAGCCC
GGTGATTATC AGGGCTGTTT GATGCACTTT TTCCCAGAGG TTGTCATCGA TGATTCTGGT
ACGCCAACGG ATCCCACAGA TCCGGTTAAT CAAGCGCCAA CAGCTAATAT TCAGGGAGTG
AGTGAAGCAG AAAGTGGAGC GGTTATCACT CTGTCAGCGT CCCAGTCTAG CGATCCTGAA
GGTGGAGTGC TCAATTACCG CTGGAGCTTA CCTATTGGTG CAAGTGCCCC CTCTGTTGAG
CAAGCATCAT TGTTATTAAC TTTACCAAGC CCTAGCAGCA CAGAAACCAT ATCAGTCTCT
CTTGAGGTGA CCGACGATGC GGGGCTAAGC GCGTCGATTA ACCATAATGT GCTGGTTACA
GTCAGTGGCG GTACGCCCCC TGATGGGGAA GTGCCTTATC AAGCTGGTTA TGCTTATGTG
GCGGGAGAGC GAGTTTCTCA TGCTGGTGGA GTTTATGAAT GTAAACCATA TCCCTATACA
GCTTGGTGCG CTGGCGCATC ATGGGCATAT GAACCCGGAG TAGGCGTTGC ATGGCAAGAT
GCTTGGATAG CGAGATAG
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| Protein sequence | MKHYLSLAIL TTLSPITLFA AEPVHFTLAE VDAKESALTD FPLMRAVKSS IATRDNAIVD
AIIPLSPNNP DNVKRLESVL SETQFEFLFP VRAAEYTYQG LLQAAAKFPA LCGSYIDNRD
ADAICRKSLA TMFAHFAQET GAHDKWMTEP QWRQGLYWVR EVGWDETKRG GYNMECSPDT
WQGQVWPCGT FADGSYKSYF GRGAKQLSYN YNYGPFSDAM FGDVSTLLNN PEMVADTWLN
LASAVFFFTY PQPPKPSMLH VIDGTWQPNA RDTQNGLSAG FGATTHIING GIECGSGSEK
PQSLNRIEYY QAHAQYLGVP VEASEVLGCK DMKPFDNQGA GAMLIYWEQD WSYIAGNPNG
GKSYACKLVG YQTRYSAFKP GDYQGCLMHF FPEVVIDDSG TPTDPTDPVN QAPTANIQGV
SEAESGAVIT LSASQSSDPE GGVLNYRWSL PIGASAPSVE QASLLLTLPS PSSTETISVS
LEVTDDAGLS ASINHNVLVT VSGGTPPDGE VPYQAGYAYV AGERVSHAGG VYECKPYPYT
AWCAGASWAY EPGVGVAWQD AWIAR
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