| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1071 |
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| Symbol | |
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| ID | 6115305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1389170 |
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| End bp | 1390960 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641632554 |
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| Product | ATPase central domain-containing protein |
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| Protein accession | YP_001759459 |
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| Protein GI | 170725433 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGCT TTCCTAGTGA AGCAAATAAA AGGTTCTCTT GTATCCCATT AATTAATTCA
TGTATTGATT GGGGAAGATA TAGCTTCTCT GGTGAACAGC ATCGTTTATT GATTGGGCTA
ATCCTTGGTG CTTTTGTACT TTATAATTAC GAAATTTATG TGGGCTTTAT TCTCAATCCA
CCTGTATTAA TACTTATCCC CGTAGTCTTG CTTTGCCTTG TCGGGATAGT GCTTCGGCTC
ACCTCTGATG TTGTTAAGGA GCGTCTTAGC GAGGTGGAGT GGGAGTATGG TTCCCGCTGG
TACTTAGGGG CGTTTTTTCT TGTTCTAATC TGGCAAGCTA TTCTATTGCA CTTACATGTG
GTTGATATGT ATTTTAGTTG GGATAATGCT ATTGGTAGCT CTTATCGACG AGGAGAGCTA
TATAGCGCTA TTTCAACCAC CTTGGCTGTT TTTCTCCTTC ATTACTACGC ACTTGCTAAA
CCTGCTGTAA CTTCGGGATT CCTTATCTAT TTCGCGACAA TGAAAAAGGA GGAGATTGGA
GTTGAGGTTA AAAGTAGCGA TCCAGTAATC GATTGGGCAA AGATGCGCCA AGATAAGATC
AATAACTTTA CTGGTATGCG CCGCTCTATT GTGACAGGTA CAGTGCGTTT CGATAGAACA
AAGTATTGTG ATAAAGATAC CGCTGAGCAG TATGTTTTCG ATTTCCTTCA ACTTTCTCCT
AAGGCAAAGA TTGCACACTT TACTATGCCA GAGTCTGAAG AGCTTGGCTT AATTGAGAGC
TATATTGTGC ATCTAACTCG TGCTGCGCTG GAGTTTGGTT TCAAACCAAG TCAAATATCA
ATAAGTGGCA ACCAATATAT TCGTAATAAA GATGCCAGTA ATTTATCGCA ACAGACCATC
GCAGAATTTT TCTCTGACAT CGCGAGTGTT GAACAAGAGC GAGCCAACGA GGAGATCGCG
AAGGAGCAGA GAGTTCAAGT GCTTGATAGC ATGATAGGTC TAAAGCGGGT GAAAGAGGAA
GTTAGGCGGC TTAATGCCAT GCTCACTTAT AACCAGCAGC GCCAGCAAGA GGGATTAGCA
GAGCTGGAGC AGGGGGCGTA CCACATGGTC TTTACTGGTA ACCCTGGTAC AGGTAAAACC
GTTATTGCTC GCCTGATTGC TGAGATGTTG TTTGATAAGG GAGTATTAAA GAATAAAAAA
GTTGTTGAGG TGACCCGTAG CGATTTAGTG GCTCAATATA TTGGGCAAAC AGCGCCTAAA
GTGAGAGCTG TGGTCGATAG TGCCATGGGG GGAGTTCTGT TTATCGATGA AGCCTATAGT
TTAGCGAAAG GCGGTGAGAA TGATTTTGGC TCCGAGGCGA TAGATGAGCT GTTAAAGCTG
ATGGAAGATA GACGTGGTGA CTTTGTTGTT ATCACCGCCG GTTATCAAAA AGATATGGAT
GACTTCCTGC AGGCGAACGA AGGACTCAAG CGCCGTTTTG CCCGCTTTAT TCATTTTGAT
GATTACTCTG ATGGTGAGTT GCTGGGTATT TTGTCGCTTA TGGCTGGAAA AGCGGGTGAC
AAATTTGAAG AGGAGTTTAG TCGTGAGTTA CCTGAACTGA TAAGTCAGTG GCGCGCAGCT
TATGGTAAAG GATTCGGTAA TGCTGGCTCG GTACGCCAGA TGTTGGAAGC TATGCAGAAA
TCGCGTCCTC TTCGCCTGAT AGAGCAAGGT ATTGAGATGA AGGGCGATGC ATTGGTGATG
CTTACCCGTA GTGATTGGGA CTCGGCTGTT GAGATGACCA GCTTTGGTTA A
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| Protein sequence | MQSFPSEANK RFSCIPLINS CIDWGRYSFS GEQHRLLIGL ILGAFVLYNY EIYVGFILNP
PVLILIPVVL LCLVGIVLRL TSDVVKERLS EVEWEYGSRW YLGAFFLVLI WQAILLHLHV
VDMYFSWDNA IGSSYRRGEL YSAISTTLAV FLLHYYALAK PAVTSGFLIY FATMKKEEIG
VEVKSSDPVI DWAKMRQDKI NNFTGMRRSI VTGTVRFDRT KYCDKDTAEQ YVFDFLQLSP
KAKIAHFTMP ESEELGLIES YIVHLTRAAL EFGFKPSQIS ISGNQYIRNK DASNLSQQTI
AEFFSDIASV EQERANEEIA KEQRVQVLDS MIGLKRVKEE VRRLNAMLTY NQQRQQEGLA
ELEQGAYHMV FTGNPGTGKT VIARLIAEML FDKGVLKNKK VVEVTRSDLV AQYIGQTAPK
VRAVVDSAMG GVLFIDEAYS LAKGGENDFG SEAIDELLKL MEDRRGDFVV ITAGYQKDMD
DFLQANEGLK RRFARFIHFD DYSDGELLGI LSLMAGKAGD KFEEEFSREL PELISQWRAA
YGKGFGNAGS VRQMLEAMQK SRPLRLIEQG IEMKGDALVM LTRSDWDSAV EMTSFG
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