| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1059 |
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| Symbol | valS |
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| ID | 6115293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1374816 |
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| End bp | 1377716 |
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| Gene Length | 2901 bp |
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| Protein Length | 966 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632542 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001759447 |
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| Protein GI | 170725421 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.106828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAA CATACAATCC GCAGTCTATC GAACAGTCTC TTTACCAAAA CTGGGAAGAG
AAAGGTTACT TCAAGCCCCA TGGCGACGAG TCTAAGGGCA ACTATTGCAT CATGATCCCG
CCACCAAATG TGACGGGTAG TTTGCATATG GGTCATGCTT TCCAAGACAC CATTATGGAT
ACTTTGACCC GTTATCAGCG TATGAAGGGC AAAAACACCC TTTGGCAGGT CGGTACCGAC
CATGCTGGTA TCGCAACTCA GATGTTGGTT GAGCGTAAAG TGGCAGCTGA AGAGGGCTTA
AATCGTCACG ATTTAGGTCG CGATGCGTTT ATTGACCGTA TCTGGGACTG GAAGAATGAG
TCCGGCGGCA CCATCACTAA GCAGCTACGC CGTCTTGGCG CTTCGGTTGA TTGGGATCGT
GAGCGTTTCA CTATGGATGA GGGCATGTCT GATGCGGTTC AAGAGGTCTT TGTTCGTCTG
TATGAAGATG ACCTAATCTA CCGTGGTAAG CGCCTAGTAA ACTGGGATCC AACACTGCAC
ACCGCTATCT CAGACTTGGA AGTTGAGAAC AAAGAGAAGC AAGGTAGCAT GTGGCATTTC
CGCTATCCAC TAGCCGATGG CGCATTGACC GCTGACGGTA AAGATTACCT TGAAGTGGCA
ACCACCCGTC CTGAAACCAT GTTAGGTGAC AGCGCCGTGG CGGTTCACCC TGATGATGAG
CGTTATGCCT CGCTTATTGG CAAGTTTATT CTTTTGCCAA TCGTTAACCG TCTTATCCCG
ATTGTGGCCG ACGACTATGT CGACATGGAG TTCGGTACTG GTTGTGTGAA GATCACCCCA
GCTCACGATT TTAACGATTA TGAAGTGGGT AAGCGTCATG CGCTACCTAT GTACAACATC
TTAACCTTCG ATGCCGCAAT TCGTTCAAGC GCCGAAGTGG TAAACACAGA TGGCACAGCA
AATAACGAGT TAGATAACAC GCTTCCTGAG CGTTATGCAG GTCTTGATCG CTTTAAAGCC
CGAACAGCGA TTGTTGCCGA ATTTGAAACC TTAGGCTTAC TTGGAAAAAT CGATCCCCAC
GGATTGAAAG TTCCTTATGG CGATCGCTCT GGTGTGGTCA TTGAGCCTTT ACTGACAGAT
CAGTGGTATG TGTCAGTTGC TCCTATGGCA AAAACAGCCA TGGAAGCGGT GGATAACGGC
GATATCAAGT TTGTGCCACA GCAGTATGAG AACATGTACA ACTCTTGGAT GCGTGATATT
CAAGACTGGT GTATCTCACG TCAGCTTTGG TGGGGTCACC GTATCCCAGC TTGGTACGAC
GAGGCGGGTA AGGTCTATGT TGGCCGTGAT GAAAGCGAAG TTCGTGCTAA GCACAAACTT
GACGATTCTA TCGTGCTTCG CCAAGACAAC GATGTACTCG ATACCTGGTT TAGCTCTGCA
TTATGGACCT TCTCGACCTT AGGTTGGCCA AAAGATACCG CCGAGCTTAA AGCTTTCCAC
CCAACAGATG TGTTGGTAAC AGGTTTTGAT ATTATTTTCT TCTGGGTTGC TCGCATGATC
ATGATGACCA TGCACTTCAT TAAAGATGAA AACGGCAAGC CTCAAGTGCC ATTTAAAACA
GTTTACGTGA CGGGTCTTAT CCGTGATGAA GCTGGTAATA AGATGTCGAA GTCTAAGGGT
AACGTACTCG ATCCATTGGA TATGATTGAC GGTATCGATC TTGAGTCACT AGTGACGAAA
CGTACTGGTA ACATGATGCA GCCAAAACTG GCCGCTAAGA TTGAAAAGAG CACACGCAAA
GAGTTTAGTG ACGGCATCGA AGCTCACGGT ACCGATGCAC TGCGCTTTAC CTTAGCCTCT
ATGGCATCGA CTGGTCGTGA CATTAACTGG GACATGAAGC GCCTCGACGG TTACCGCAGC
TTCTGTAACA AGATCTGGAA CGCATCACGC TACGTACTGA TGAATACTGA AGTACAAGCA
GATGATGCAG CAGAGGACTC TATCGGTGAA GCACTCGATT GTGGTCAACA TGGCGGTGAA
ATGGAACTGT CTCTTGCAGA TCGCTGGATT ATCGGTTTGT TTAATGAAAC CGTTAAAGCC
TATGACGAGC ACATGGAGAA CTACCGTTTC GACCTAGCGG CAAACACCAT CTATGAGTTC
ACTTGGAACC AGTTCTGTGA CTGGTACTTA GAGCTAACTA AGCCTGTAAT GCAAAATGGC
ACCGAAGCTC AGCTTCGTGG TACACGCCAC ACCTTAGTGA CTGTACTTGA GAAGATGCAA
CGTCTGATGC ACCCGATGAT GCCTTACCTG ACAGAGACCA TCTGGAAGCG TGTGCAGCCA
TTAGCAGGTG TTGAAGGTGA TACCTTGATG TTGGCGAGTT TCCCTGAATA TCAAGCTGAC
AAAGTTGATA GTGAAGCGAT GGAAGATCTT GAGTGGGTGA AGCAAGTGAT CACTGCGGTA
CGTAACATCC GCGCTGAGCT GAACATAGCG CCATCTAAGC CGCTTAATGC CCTACTACGT
GGTGTGAGCG ACAAAGACAA AGCTCGCCTT GAGGCAAATC AGGTGTTCTT CACCACGCTC
GCTAAGCTTG AGACCATCAC TATCATGTCT GAAGATGATG TCGCACCTAT GTCAACCACC
CAGTTGATCG GTGATATGGA GCTACTGATC CCGATGGCAG GTCTTATCGA CGTGGCTAAA
GAGGTTGCCC GTATCGACAA GCTGCTCGAG AAGGCTGCTG GTGAGTTTAA GCGCATCGAA
GGTAAGCTCT CTAACCAAGG TTTCGTGGCT AAAGCGCCAG CAGCCGTGAT TGAGAAAGAG
CGCGCTAAGC AAGCTGAATA TCAGCGTGAT ATCGACAAGT TAACTGAGCA GAAAGCTGAG
CTAGCTAAGT TGGAAGGTTA A
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| Protein sequence | MEKTYNPQSI EQSLYQNWEE KGYFKPHGDE SKGNYCIMIP PPNVTGSLHM GHAFQDTIMD
TLTRYQRMKG KNTLWQVGTD HAGIATQMLV ERKVAAEEGL NRHDLGRDAF IDRIWDWKNE
SGGTITKQLR RLGASVDWDR ERFTMDEGMS DAVQEVFVRL YEDDLIYRGK RLVNWDPTLH
TAISDLEVEN KEKQGSMWHF RYPLADGALT ADGKDYLEVA TTRPETMLGD SAVAVHPDDE
RYASLIGKFI LLPIVNRLIP IVADDYVDME FGTGCVKITP AHDFNDYEVG KRHALPMYNI
LTFDAAIRSS AEVVNTDGTA NNELDNTLPE RYAGLDRFKA RTAIVAEFET LGLLGKIDPH
GLKVPYGDRS GVVIEPLLTD QWYVSVAPMA KTAMEAVDNG DIKFVPQQYE NMYNSWMRDI
QDWCISRQLW WGHRIPAWYD EAGKVYVGRD ESEVRAKHKL DDSIVLRQDN DVLDTWFSSA
LWTFSTLGWP KDTAELKAFH PTDVLVTGFD IIFFWVARMI MMTMHFIKDE NGKPQVPFKT
VYVTGLIRDE AGNKMSKSKG NVLDPLDMID GIDLESLVTK RTGNMMQPKL AAKIEKSTRK
EFSDGIEAHG TDALRFTLAS MASTGRDINW DMKRLDGYRS FCNKIWNASR YVLMNTEVQA
DDAAEDSIGE ALDCGQHGGE MELSLADRWI IGLFNETVKA YDEHMENYRF DLAANTIYEF
TWNQFCDWYL ELTKPVMQNG TEAQLRGTRH TLVTVLEKMQ RLMHPMMPYL TETIWKRVQP
LAGVEGDTLM LASFPEYQAD KVDSEAMEDL EWVKQVITAV RNIRAELNIA PSKPLNALLR
GVSDKDKARL EANQVFFTTL AKLETITIMS EDDVAPMSTT QLIGDMELLI PMAGLIDVAK
EVARIDKLLE KAAGEFKRIE GKLSNQGFVA KAPAAVIEKE RAKQAEYQRD IDKLTEQKAE
LAKLEG
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