Gene Swoo_1048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1048 
Symbol 
ID6115282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand+ 
Start bp1359984 
End bp1360607 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content44% 
IMG OID641632531 
Productputative transcriptional regulator 
Protein accessionYP_001759436 
Protein GI170725410 
COG category[K] Transcription 
COG ID[COG2345] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA GCGAGAAAAT CATTCAACTC CTTAAGACTC AAGGACCGCA AACCGCTAAA 
GTGTTAGCCA CTGAGTTGTC GTTGACGACG ATGGGAGTAC GTCAGCATAT GCAAGTACTT 
GAAGATGAAG GTGACGTTAG CTTTGAAGAT ATTAAAGCCA GTCGTGGTCG GCCGACACGA 
GTCTGGTCAC TCACAGCTAA GAGCAATAGT CATTTTACTG ATCGGCATGA AGAGTTATCG 
GTACAGCTAA TAGATTCAGT TATTAATGTA TTCGGTGATT CTGGGCTCGA TAAATTGATC 
TCCCATAGAG AGGAGACCTC GTTAGCCATG TATCAGGAGA GGTTAAGTGT AGAGAAAACA 
TTGCTAGGTA AACTCAACGC CTTGGTTGAA TTGCGTACAG CAGAAGGTTA CATGGCAAGC 
GTTGAGCAAG AAGATGACTT TTACTGGTTA TTGGAGAATC ACTGTCCTAT CTGTGCGGCT 
GCGAGCAGAT GTTTGAATTT TTGTCGCTCA GAGCTGAAGC AATTCCAAAC CTTACTGCAA 
GAGGATGCCT CTGTAAGTCG TGAAGAGCAT ATTATCGAGG GCGCCCGCCG TTGTGCCTAC 
AAAGTACAAC CAATTAAGAA GTAA
 
Protein sequence
MKTSEKIIQL LKTQGPQTAK VLATELSLTT MGVRQHMQVL EDEGDVSFED IKASRGRPTR 
VWSLTAKSNS HFTDRHEELS VQLIDSVINV FGDSGLDKLI SHREETSLAM YQERLSVEKT 
LLGKLNALVE LRTAEGYMAS VEQEDDFYWL LENHCPICAA ASRCLNFCRS ELKQFQTLLQ 
EDASVSREEH IIEGARRCAY KVQPIKK