Gene Swoo_1009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1009 
Symbol 
ID6115243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1319162 
End bp1319644 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content43% 
IMG OID641632492 
Productdihydrofolate reductase 
Protein accessionYP_001759397 
Protein GI170725371 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.415728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.43395e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATTG CCTTGATTGC AGCGATGGCT AACAATCGCG TTATAGGAAA AGATAACCAG 
ATGCCTTGGC ACCTTCCTGA GGATCTTCGT CATTTTAAAG CGATGACCTT AGGCAAGCCT
ATTGTCATGG GACGTAAGAC ATTCGATTCA ATTGGTCGAC CACTACCTGG ACGTCATAAT
ATTGTTATTA GCCGTCAAGA GGGGCTAAAG ATTGAAGGAG TAACATGTGT CAGCTCCTTC
GATGCTGCTG TAAGCGCTGC TGGTGATATT GAAGAGTTAG TTGTAATAGG TGGTGGACAG
CTCTATAGCG CTACGTTAGC GCTGGCGGAT AAGTTATACC TCACTGAAAT CAACTTAGAT
GTCGACGGGG ATACCCATTT TCCGAGCTGG GATGACGGAA GCTGGCTGTT ACTTGATGAA
GAAGTTGGCG TAAATGATAA AGGTTTGGAA TATCGCTTTA TCAATTTGGT GAAAAAATGT
TAA
 
Protein sequence
MKIALIAAMA NNRVIGKDNQ MPWHLPEDLR HFKAMTLGKP IVMGRKTFDS IGRPLPGRHN 
IVISRQEGLK IEGVTCVSSF DAAVSAAGDI EELVVIGGGQ LYSATLALAD KLYLTEINLD
VDGDTHFPSW DDGSWLLLDE EVGVNDKGLE YRFINLVKKC