| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1006 |
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| Symbol | obgE |
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| ID | 6115240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1316654 |
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| End bp | 1317823 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632489 |
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| Product | GTPase ObgE |
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| Protein accession | YP_001759394 |
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| Protein GI | 170725368 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0536] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000134861 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000589779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGAAGTTTG TCGATGAAGC TGTGATCAGA GTCGAAGCTG GTGATGGTGG TAGTGGTTGC
GTCAGTTTTA GACGTGAGAA ATATGTACCC GATGGTGGCC CAGATGGCGG CGACGGTGGT
GACGGTGGCA GTGTATATCT GCAAGCCGAT GAGAGTTATA ACACCCTTAT CGACTTTCAA
TTTGAACGTT TTCATCGTGC AGAGCGTGGC AAAAATGGCC GCGGTCGTGA CTGTACTGGA
CACGGTGGCG AAGATCTAAT TCTTACAGTG CCTGTTGGTA CCCGTGCTAT CGATGAAGAG
ACGCAAGAGT CTCTAGGTGA TTTGACCAAA CATGGTCAAA GAATGTTAGT TGCCAAAGGC
GGCTTTCACG GATTAGGCAA CACGCGCTTT AAGAGCAGTA CTAACCGTGC ACCTAGACAG
AAGACTTTAG GGACACCAGG TGAAGTACGC AGCTTAAAAC TTGAGTTAAT GCTGCTTGCT
GATGTGGGTC TTTTAGGCAT GCCTAATGCG GGTAAGTCTA CCTTTATTCG TTCTGTTTCA
AGAGCCAAGC CAAAGGTTGC CGATTACCCA TTTACTACAT TAGTGCCTAA CCTTGGTGTT
GTTAACCCAA GACATGGTCA AAGCTTTGTT ATTGCTGATA TTCCAGGTCT GATTGAAGGT
GCTGCAGATG GTGCAGGACT GGGTGTTCAG TTCCTAAAGC ACCTTGAACG TTGTCGCGTA
TTACTGCATA TCTTAGATAT CGATCCTATT GATGGCTCTG ATCCGGTAGA GTCGGCTCGT
GCGATTGTTG CTGAGCTTGA AAAACACTCA CCTAAGCTTG CAAGCAAGCC TCGCTGGTTA
GTGATTAACA AGACCGATCT TATGCTTGAA GATGAGCTTA AAGAGCGCGT AGAAAATATC
GTTAAAGAGC TTGAGTGGGA AGGCGATGTT TACACTATTT CAGCCTATAA CCGCGAAGGT
ACGGAAGCAT TAAGTCTTAA GCTTATTGAT TTTATTGAGG CTCTACCACC AGAGGAAGAG
ATAGATAAAG AAGCTGAAGT TGAGTTCAAG TGGGATAACT ACCATGAGAA TGCAAACGAG
TCATTAAATG AAAATTTTGA AGATGATTTT GATGACGATG ATGACTTCGA CGATGATGAT
TACGACGTAA AAGTGATCTA TCAAAGGTAA
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| Protein sequence | MKFVDEAVIR VEAGDGGSGC VSFRREKYVP DGGPDGGDGG DGGSVYLQAD ESYNTLIDFQ
FERFHRAERG KNGRGRDCTG HGGEDLILTV PVGTRAIDEE TQESLGDLTK HGQRMLVAKG
GFHGLGNTRF KSSTNRAPRQ KTLGTPGEVR SLKLELMLLA DVGLLGMPNA GKSTFIRSVS
RAKPKVADYP FTTLVPNLGV VNPRHGQSFV IADIPGLIEG AADGAGLGVQ FLKHLERCRV
LLHILDIDPI DGSDPVESAR AIVAELEKHS PKLASKPRWL VINKTDLMLE DELKERVENI
VKELEWEGDV YTISAYNREG TEALSLKLID FIEALPPEEE IDKEAEVEFK WDNYHENANE
SLNENFEDDF DDDDDFDDDD YDVKVIYQR
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