Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1000 |
Symbol | |
ID | 6115234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1311730 |
End bp | 1312665 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641632483 |
Product | Dyp-type peroxidase family protein |
Protein accession | YP_001759388 |
Protein GI | 170725362 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2837] Predicted iron-dependent peroxidase |
TIGRFAM ID | [TIGR01413] Dyp-type peroxidase family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.212693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00012242 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATAACC AGGTTATGCC TCGTGAACAG TTGGGTGTTT GTGCTGAAGG TAATTTGCAC AGCGTGTATT TGATGTTTAA TGCTAATGAT GGCGTCGAAT CTCAGTTACG ACCTTGTTTA GCTAACGTAG CTCAGTATGT CTATGAGCTT AGTGATCAAT ATGCTGATAG CGCATTCAAT GGCTTTGTTG CTATCGGTGC TAACTATTGG GATAGCTTAT ATCCATCAGC CCGCCCAGCG CAGTTGAAGC CGTTTCCTGC GATGAATGCA GATAATCGTG ATGCGCCAGC ACTTGAGTAT GATCTTTTTG TGCATATTCG TTGTGACCGT TTCGATATTC TACACCTGGT TGCTAATGAA GTGTGCCAAA TGCTTGAGGG GCTCGTTGAG CTTGTTGATG AAGAGCGTGG CTTCCGCTTC ATGGATAATC GCGATCTCAC AGGTTTTGTC GATGGCACTG AAAATCCGAA AGGGCGTAAT CGCCAAGAGG TTGCATTAGT AGGTAGTGAA GATGAGGCTT TCAAAGCTGG CAGTTATATT CATGTACAGA AATATGCACA TAATTTAAGT AAGTGGCATA GGCTCCCGCA AAAGAAGCAG GAGGATATCA TTGGCCGTAC AAAGCAGGAC AATATTGAGT ACGCATCTGC CGACAAACCG TTAACAAGCC ACATTAAGCG AGTTAATCTC AAAGACGAGC AGGGTAATTC GATGGAGATC TTGAGACAAA GTATGCCTTA TGGTTCGGTT AAAGAGCAGG GGCTTATGTT TATCTCAAAC TGTGGGAACT CAGTTAACTT TGAAAAGATG CTTGAAAGTA TGGTTCAGGG AGATGGGCAT GGGCACCATG ATCACTTACT TCACTTTACC CAAGCATTAA CAGGTTCCTC TTTCTTTGCT CCTTCACTGG ATTTTATGGA AAAAGCTGCG GATTAA
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Protein sequence | MDNQVMPREQ LGVCAEGNLH SVYLMFNAND GVESQLRPCL ANVAQYVYEL SDQYADSAFN GFVAIGANYW DSLYPSARPA QLKPFPAMNA DNRDAPALEY DLFVHIRCDR FDILHLVANE VCQMLEGLVE LVDEERGFRF MDNRDLTGFV DGTENPKGRN RQEVALVGSE DEAFKAGSYI HVQKYAHNLS KWHRLPQKKQ EDIIGRTKQD NIEYASADKP LTSHIKRVNL KDEQGNSMEI LRQSMPYGSV KEQGLMFISN CGNSVNFEKM LESMVQGDGH GHHDHLLHFT QALTGSSFFA PSLDFMEKAA D
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