Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0999 |
Symbol | |
ID | 6115233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1309875 |
End bp | 1311569 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641632482 |
Product | gamma-glutamyltransferase |
Protein accession | YP_001759387 |
Protein GI | 170725361 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0405] Gamma-glutamyltransferase |
TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000130628 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATAG AAATAGTAGC TGTCTTTATC GCCTTAGTGA CATTTGGGGC TAATGCTGCA GACAGAATAA CAGGTAAACC TTTTGCGACT CGTTCTGAGG TCCTAGCCAC CAATGGAATG GCTGCTACCA GCCAGCCCCT TGCAACCCAA GTGGCTCTGG ATATCCTTAA ACAAGGTGGC AGTGCTGTTG ATGCTGCTAT CGCTGCCAAT GCGATGTTGG GCCTGGTAGA ACCGACGGGC TCTGGTATCG GTGGCGATCT ATTCGCCATT GTATGGAGCG CTAAAGATAA GCGCCTTTAT GGTATCAATG GCTCTGGAAA AAGCCCAAAA AGCTTAACTT TAGCTAAATT AAAACAGCTA AATTTAGACT ATCTTCCTCC CTATGGGCCT TTGCCTGTTT CAGTTCCTGG TGCAGTGGAT GCTTGGTTCG AACTTCATGA TAAGTTTGGT AAGCTTAAAA TGGCCAGCAA CTTAGCCCCT GCAATCGATT ATGCTCGCCA AGGCTTCCCT GTTTCAGAGC TTATCGCTTA CTACTTAGCA CGAAGCGCAC CTAAATTATC TCAATATCCT GGTTTTAAAG AGACCTACAT GCCTAGTGGC AAGATGCCAA AGAGTGGTGA GATCTTTAAA AATCCAGCGT TAGCGAATAC CTATGAAAAA ATTGCGTCAG GTGGGAGAGA GGCTTTTTAT CAAGGGGTTA TTGCTAAGAG CATTGTCAGA TATATGAAAG ATCAGGGCGG ATACCTCTCC TATGAAGATT TAAGTGAGCA TAAGAGTGAG TGGGTTGAGC CCGTTTCAGT GAACTACCGC GGCTATGATG TGTGGGAGCT TCCCCCCAAT GGACAAGGTA TTGCAGCATT ACAGATTTTA AAAACCTTAG AGCCATTTAA TCTCGAGCAA ATGGGGCCGG GGAGCACTGA ATATATTCAT CATTTTGTTG AGGCTAAAAA GTTGGCCTTT GCCGATAGAG CCAAGTTTTA TGCTGATATG GACTTTAACG CTATCCCTGT GGCTGAGCTT ATCTCTGAGG AGTATAACTA CCAAAGGGCC AAGCTTATTG ATGCAAACCA GGCTAAAAGA GTTGTTGATG CAGGCCATCC TGCATTAATG CATGGTGATA CCGTGTATCT GACTACCGCA GACCGCGAAG GAAATATGGT GTCGTTAATT CAAAGTAACT TTAGAGGGAT GGGGTCGGGA ATGACGCCGC CAGATTTAGG CTTTGTATTG CAAGACCGTG GTCAGCTGTT TGATCTTAGC CCTGGACGTT TTAATAGCTA CGCTCCAGGT AAGCGCCCAT TTCATACCAT TATTCCTGCT TTTGTTACTA AAAATGGCAA GCCCTGGTTG AGTTTTGGCG TCATGGGTGG TGCCACTCAA CCTCAGATGC ATGCACAGAT CTTGATTAAC TTACTCGACT TTAAGATGAA CCTACAGGAA GCGGGAGATG CACCGAGAAT TTTGCACTCT GGTTCATCTC AGCCCACAGG GGAGAAGATG TCTGATGGCG GATATATTAG TTTGGAGTCT GGTTTTTCTG TTCAGACGAG AAGAGAGTTA ATCAAGAAAG GTCATAGTTT AAAAGATAAC TTAGGTGGGT TTGGTGGTTA TCAAGCAATA GCGGTTGATC CTGATACTGG CGTTTATCGG GGTGCTTCTG AAAGCCGCAA GGATGGACAA GCTTCGGGGT ATTGA
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Protein sequence | MKIEIVAVFI ALVTFGANAA DRITGKPFAT RSEVLATNGM AATSQPLATQ VALDILKQGG SAVDAAIAAN AMLGLVEPTG SGIGGDLFAI VWSAKDKRLY GINGSGKSPK SLTLAKLKQL NLDYLPPYGP LPVSVPGAVD AWFELHDKFG KLKMASNLAP AIDYARQGFP VSELIAYYLA RSAPKLSQYP GFKETYMPSG KMPKSGEIFK NPALANTYEK IASGGREAFY QGVIAKSIVR YMKDQGGYLS YEDLSEHKSE WVEPVSVNYR GYDVWELPPN GQGIAALQIL KTLEPFNLEQ MGPGSTEYIH HFVEAKKLAF ADRAKFYADM DFNAIPVAEL ISEEYNYQRA KLIDANQAKR VVDAGHPALM HGDTVYLTTA DREGNMVSLI QSNFRGMGSG MTPPDLGFVL QDRGQLFDLS PGRFNSYAPG KRPFHTIIPA FVTKNGKPWL SFGVMGGATQ PQMHAQILIN LLDFKMNLQE AGDAPRILHS GSSQPTGEKM SDGGYISLES GFSVQTRREL IKKGHSLKDN LGGFGGYQAI AVDPDTGVYR GASESRKDGQ ASGY
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