Gene Swoo_0999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0999 
Symbol 
ID6115233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1309875 
End bp1311569 
Gene Length1695 bp 
Protein Length564 aa 
Translation table11 
GC content45% 
IMG OID641632482 
Productgamma-glutamyltransferase 
Protein accessionYP_001759387 
Protein GI170725361 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0405] Gamma-glutamyltransferase 
TIGRFAM ID[TIGR00066] gamma-glutamyltranspeptidase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000130628 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATAG AAATAGTAGC TGTCTTTATC GCCTTAGTGA CATTTGGGGC TAATGCTGCA 
GACAGAATAA CAGGTAAACC TTTTGCGACT CGTTCTGAGG TCCTAGCCAC CAATGGAATG
GCTGCTACCA GCCAGCCCCT TGCAACCCAA GTGGCTCTGG ATATCCTTAA ACAAGGTGGC
AGTGCTGTTG ATGCTGCTAT CGCTGCCAAT GCGATGTTGG GCCTGGTAGA ACCGACGGGC
TCTGGTATCG GTGGCGATCT ATTCGCCATT GTATGGAGCG CTAAAGATAA GCGCCTTTAT
GGTATCAATG GCTCTGGAAA AAGCCCAAAA AGCTTAACTT TAGCTAAATT AAAACAGCTA
AATTTAGACT ATCTTCCTCC CTATGGGCCT TTGCCTGTTT CAGTTCCTGG TGCAGTGGAT
GCTTGGTTCG AACTTCATGA TAAGTTTGGT AAGCTTAAAA TGGCCAGCAA CTTAGCCCCT
GCAATCGATT ATGCTCGCCA AGGCTTCCCT GTTTCAGAGC TTATCGCTTA CTACTTAGCA
CGAAGCGCAC CTAAATTATC TCAATATCCT GGTTTTAAAG AGACCTACAT GCCTAGTGGC
AAGATGCCAA AGAGTGGTGA GATCTTTAAA AATCCAGCGT TAGCGAATAC CTATGAAAAA
ATTGCGTCAG GTGGGAGAGA GGCTTTTTAT CAAGGGGTTA TTGCTAAGAG CATTGTCAGA
TATATGAAAG ATCAGGGCGG ATACCTCTCC TATGAAGATT TAAGTGAGCA TAAGAGTGAG
TGGGTTGAGC CCGTTTCAGT GAACTACCGC GGCTATGATG TGTGGGAGCT TCCCCCCAAT
GGACAAGGTA TTGCAGCATT ACAGATTTTA AAAACCTTAG AGCCATTTAA TCTCGAGCAA
ATGGGGCCGG GGAGCACTGA ATATATTCAT CATTTTGTTG AGGCTAAAAA GTTGGCCTTT
GCCGATAGAG CCAAGTTTTA TGCTGATATG GACTTTAACG CTATCCCTGT GGCTGAGCTT
ATCTCTGAGG AGTATAACTA CCAAAGGGCC AAGCTTATTG ATGCAAACCA GGCTAAAAGA
GTTGTTGATG CAGGCCATCC TGCATTAATG CATGGTGATA CCGTGTATCT GACTACCGCA
GACCGCGAAG GAAATATGGT GTCGTTAATT CAAAGTAACT TTAGAGGGAT GGGGTCGGGA
ATGACGCCGC CAGATTTAGG CTTTGTATTG CAAGACCGTG GTCAGCTGTT TGATCTTAGC
CCTGGACGTT TTAATAGCTA CGCTCCAGGT AAGCGCCCAT TTCATACCAT TATTCCTGCT
TTTGTTACTA AAAATGGCAA GCCCTGGTTG AGTTTTGGCG TCATGGGTGG TGCCACTCAA
CCTCAGATGC ATGCACAGAT CTTGATTAAC TTACTCGACT TTAAGATGAA CCTACAGGAA
GCGGGAGATG CACCGAGAAT TTTGCACTCT GGTTCATCTC AGCCCACAGG GGAGAAGATG
TCTGATGGCG GATATATTAG TTTGGAGTCT GGTTTTTCTG TTCAGACGAG AAGAGAGTTA
ATCAAGAAAG GTCATAGTTT AAAAGATAAC TTAGGTGGGT TTGGTGGTTA TCAAGCAATA
GCGGTTGATC CTGATACTGG CGTTTATCGG GGTGCTTCTG AAAGCCGCAA GGATGGACAA
GCTTCGGGGT ATTGA
 
Protein sequence
MKIEIVAVFI ALVTFGANAA DRITGKPFAT RSEVLATNGM AATSQPLATQ VALDILKQGG 
SAVDAAIAAN AMLGLVEPTG SGIGGDLFAI VWSAKDKRLY GINGSGKSPK SLTLAKLKQL
NLDYLPPYGP LPVSVPGAVD AWFELHDKFG KLKMASNLAP AIDYARQGFP VSELIAYYLA
RSAPKLSQYP GFKETYMPSG KMPKSGEIFK NPALANTYEK IASGGREAFY QGVIAKSIVR
YMKDQGGYLS YEDLSEHKSE WVEPVSVNYR GYDVWELPPN GQGIAALQIL KTLEPFNLEQ
MGPGSTEYIH HFVEAKKLAF ADRAKFYADM DFNAIPVAEL ISEEYNYQRA KLIDANQAKR
VVDAGHPALM HGDTVYLTTA DREGNMVSLI QSNFRGMGSG MTPPDLGFVL QDRGQLFDLS
PGRFNSYAPG KRPFHTIIPA FVTKNGKPWL SFGVMGGATQ PQMHAQILIN LLDFKMNLQE
AGDAPRILHS GSSQPTGEKM SDGGYISLES GFSVQTRREL IKKGHSLKDN LGGFGGYQAI
AVDPDTGVYR GASESRKDGQ ASGY