Gene Swoo_0979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0979 
Symbol 
ID6115213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1290266 
End bp1290604 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content45% 
IMG OID641632462 
Productnitrogen regulatory protein P-II 
Protein accessionYP_001759367 
Protein GI170725341 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.594986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGG TCAGCGCTAT CATTAAGCCG TTTAAGTTAG ATGATGTCCG TGAAGCGATT 
GCGGGTGTCG GTATTGAGGG GATGACGGTT ACAGAGGTAA AGGGTTTTGG TCGTCAAAAA
GGGCACACTG AGCTATATCG TGGCGCAGAG TATCAGGTCG ATTTCCTACC AAAAGTTAAA
CTTGAGATCG CCACGAAAGC GGAGAATCTT GAGTTGCTTA TTGAGTCGAT TGTGAATGCT
TCTAGAACTG GAAAAATTGG TGACGGAAAG ATTTTTGTGT CGGATTTAGA ACAAGCCATC
CGTATTCGTA CGGGCGAGCT AGATAACGAA GCACTTTAA
 
Protein sequence
MKLVSAIIKP FKLDDVREAI AGVGIEGMTV TEVKGFGRQK GHTELYRGAE YQVDFLPKVK 
LEIATKAENL ELLIESIVNA SRTGKIGDGK IFVSDLEQAI RIRTGELDNE AL