Gene Swoo_0968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0968 
Symbol 
ID6115202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1280042 
End bp1280821 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content45% 
IMG OID641632451 
Productpeptidylprolyl isomerase FKBP-type 
Protein accessionYP_001759356 
Protein GI170725330 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.67917e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAA TTTATAAAAT CTCACTGGTT GCGTTGGCCG TTATTGGTCT GTCAGCTTGT 
AATCAAGAAC AAAAAACAAC TGAAACTGCT GCCAATGTTG AATTGAAAAC AGAAGCACAG
AAACAAGCCT ACAGCGTTGG CGCATCTATT GGTAAGTATA TGTCAGGTCA CATCAAGGAG
CAGGAAGAGT TAGGTTTACC TGTTGACCGT AGTCTTATCA TCACAGGTTT TAGCAATGGC
TTGAACGACG AGCTTAAGCT AACCGAAGAG GAGATGCAGA CTGTACTTCA GACTCTTGAT
GAGAAGTTAA ATGAGAAGCG TCAAGCTCAA GCGACTGCTT TAGCTGAGAA AGCGGCTGCT
GATAGCGCTG CATTCCTAGA GACAAATAAA GCCAAAGAGG GTGTTGTCAC TACTGAATCT
GGCCTTCAGT ACGAAGTATT GACTCCAGGT ACAGGTGAGA AGCCAAAGGC TGAAGATACT
GTTCAGGTAC ACTATGTTGG TACATTAACT GACGGTACTG AATTTGATAG TTCAGTTGCT
CGTGGCGAGC CAGCTAAGTT CCCACTAAAT CGTGTTATCC CAGGTTGGAC TGAAGGTGTT
CAGTTGATGC CAGTTGGTGC TAAGTACAAG TTCGTTATCC CTGCAGAGCT TGCTTATGGC
GATCGTGATA CAGGTACTAT CCCTGCTAAC TCAACGCTAG TGTTTGAGGT TGAACTGCTC
TCTATTGAAG AAGCACCAGC TCCTACTGCA GAAGCAGCAC CAGAAGCTCA CGCACACTAA
 
Protein sequence
MKSIYKISLV ALAVIGLSAC NQEQKTTETA ANVELKTEAQ KQAYSVGASI GKYMSGHIKE 
QEELGLPVDR SLIITGFSNG LNDELKLTEE EMQTVLQTLD EKLNEKRQAQ ATALAEKAAA
DSAAFLETNK AKEGVVTTES GLQYEVLTPG TGEKPKAEDT VQVHYVGTLT DGTEFDSSVA
RGEPAKFPLN RVIPGWTEGV QLMPVGAKYK FVIPAELAYG DRDTGTIPAN STLVFEVELL
SIEEAPAPTA EAAPEAHAH