| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0965 |
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| Symbol | |
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| ID | 6115199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1277073 |
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| End bp | 1278440 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632448 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001759353 |
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| Protein GI | 170725327 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3014] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00115055 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGT GGCTACTTAT TCCACTGCTC AGCTTATCGC TAACAGGCTG CGCATTTAAC
AGTATCTTCA TTAATTACCC CTCTCAGATC GCGCCAGTAA AAGCGCAGAT AAACAGCAAT
GATCCGATAA AGGGTGCCGA TGAGGTTGCT GATAATATCT CAGGTGCCGA TGGCCTGCTC
TATGCCCAAG AAGCGGGCAG AGTCGCTCAA ATCGCTGGGG ATTTTGAAGC CAGTAAAGCC
TACTACCAAC AAGCTGTTGC TGCTTACCTT GAGTTTGACG ACAAAGCGAC CCTGAGCGCA
TCAGATCTAG GTGCCACAGC CAGCAGTCTA TTTATCAACG ATAACGTCAT TCCCTACCGC
GGCCCAGGTT ATGAAAGAGT GATGCTGCAT CAGTATCAGG CACTCAACTA CCTGTTAAGT
GGTGATAAAG AGGGAGCGTT AGTCGAAGTT AGGCGCAGCA ATAACTTACA AAGCTCTGAG
CAGCGCAGAT ACCAAAAATC CAATGAGTCG GTTCAAGCGA TTGCCAATGG CACCATTGAT
GCAGAAGTCA ACAAGCTGGG CCAAGCGGCA GGAAGCGTCA CCAGCTCATT TTTAAATGCT
TACAGCTATT ACATCACCGG GGTGCTCCAC GAAATATTAG GGGAGCCCAA TGACGCCTTT
ATCGATTACC GTAAAGCAGC TCAAATCGCT CCCAATAATC CCTACGTGCA AAAAGATCTC
GTTCGCTTAG CAAAGCAGCT CTCTATGCCT CAAGCCGATG AGTTTGAGAA GCGCTGGGGC
AAAGCGGCCA AGCCGAAAAA GGGTGAGGGA GAGGTTATCA TCTTGGTTGA ACGTGGCTTT
GTTGACGAAA AACAGAGCTT AACAGTCCCT TTCCGAGTCC ATGGTAGTTG GCAAACCGCG
TCTCTGGCGA CCTACCCATT TAACTCCCGC CCTGTCGCTA AGGGGCAAAT CAAAGGCTTA
GATAAGCGTT TAACCGCTGC ACCTATCGCT AATATCGATG CGCTAGCCAT CACGGCTCTA
AAAGAGGAGC TACCTGCCGC TTTGGTCCGT CAAGCAGCGA GGGCCTATGC AAAAGCTGAG
ATGGCTAGAA GTGTACGCAG TGAATCTAAG GCGCGTAACA ATGAAACCGA TTTCGGCTCC
ATCGCCATGC AGATATTCAA TGTCGTCACT GAGCAAGCTG ATAGACGTAG CTGGCTAACC
TTGCCTAAGC AGGCTCAAAT AGCACGAACT TACGTTAATC AAGGCCAGTA TTCAGTCCAA
TTGGACAACT CCTCTCCCGC CTCTGTAGAG GTAAAAAGTG GAAGAACAAC ACTGGTTTGG
GTAATCGACA CTGGTAATTA CACCCGTTTT TATTCAATAA TCATTTAA
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| Protein sequence | MKKWLLIPLL SLSLTGCAFN SIFINYPSQI APVKAQINSN DPIKGADEVA DNISGADGLL
YAQEAGRVAQ IAGDFEASKA YYQQAVAAYL EFDDKATLSA SDLGATASSL FINDNVIPYR
GPGYERVMLH QYQALNYLLS GDKEGALVEV RRSNNLQSSE QRRYQKSNES VQAIANGTID
AEVNKLGQAA GSVTSSFLNA YSYYITGVLH EILGEPNDAF IDYRKAAQIA PNNPYVQKDL
VRLAKQLSMP QADEFEKRWG KAAKPKKGEG EVIILVERGF VDEKQSLTVP FRVHGSWQTA
SLATYPFNSR PVAKGQIKGL DKRLTAAPIA NIDALAITAL KEELPAALVR QAARAYAKAE
MARSVRSESK ARNNETDFGS IAMQIFNVVT EQADRRSWLT LPKQAQIART YVNQGQYSVQ
LDNSSPASVE VKSGRTTLVW VIDTGNYTRF YSIII
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